Oryza sativa japonica (Japanese rice) (RefSeq): 4331489
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Entry
4331489 CDS
T01015
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03420
Nucleotide excision repair
osa03430
Mismatch repair
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4331489
03410 Base excision repair
4331489
03420 Nucleotide excision repair
4331489
03430 Mismatch repair
4331489
03440 Homologous recombination
4331489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4331489
03400 DNA repair and recombination proteins [BR:
osa03400
]
4331489
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
4331489
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
4331489
MMR (mismatch excision repair)
DNA polymerase delta complex
4331489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
4331489
NCBI-ProteinID:
XP_015629014
UniProt:
Q9LRE5
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Position
3:complement(1612382..1616472)
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AA seq
429 aa
AA seq
DB search
MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG
LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL
AGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSI
GSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQ
SRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCS
NPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTD
KDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLECST
LSFSTSFDA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagcaggcggagtacagcaacctcgacgagaggtacgcgatccagggggag
aagtaccaggggcagcagtacagccacatctacttcacgcgactccaccacatgcgcaac
ctcctccacgccctcgtcccctcctggaagccgcaccttcctgttactactgtgttggga
cttgaagaaggaaaggattgcataatcgttggaactttatataagcacatgaaattaaag
ccttccattcttgatgaatattctaaggagaggtctgctattcctcttgttaaaccacac
aatttcatgcatcctgatgatcatctcattctggaagatgaaagtgggagagttacactt
gcaggagccatacctccagcagcatatgttactggagttgtaatagctttacatgggaaa
gaaacaagtgctggcaactttcttgttgaagatattcttgaggctgggattcctcctcaa
attacgttacctagcataaacgaggacaaatatgtggtatttgtgtcgggattaagtatt
gggagtgaaaaattcaatcctctgcaattccaacttcttatagaccatatcacagggcat
ttgggtgatgagaatgagcaatccatagcatccaacatagtacgtgttgtggtggctggg
aattcggtacatatttctccaagattcttcaatggtcaggcagtagcatcgaaagatcaa
tccaggatagctgaaccaatcaaagaattggatataatgctcactcagcttgtggcatca
ttgcctgtggacatgatgcctggatctaatgacccagcaaatttttctttgcctcaacag
cctttgcatagatgcctttttgctggagcagccacttataacactttttcatcgtgctcg
aatccacatcaattcgagcttgatagtgtccggtttattggaacatctggacagaacata
gatgacctctacaagtactctgatgccaaagacaagctggaattcgtggaaagaacactg
cggtggcgtcatcttgctccaactgctccaaacagtctaggatgttatccatacacagac
aaggatccttttctcgttgaaagctgtccccatgtttacttcgtcgggaatcaagataaa
tatgaaactcaattattgcaagggctagaaaaacaaaaagtgaggctgatctgcattcca
agattttgtgatagtggagttgctgtcatgctcaatttgaggaacttggagtgcagcacg
ttgagtttctcaacaagcttcgatgcttga
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