Oryza sativa japonica (Japanese rice) (RefSeq): 4334316
Help
Entry
4334316 CDS
T01015
Name
(RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00030
Pentose phosphate pathway
osa00710
Carbon fixation in photosynthetic organisms
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01200
Carbon metabolism
osa01230
Biosynthesis of amino acids
Module
osa_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
osa_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
osa_M00165
Reductive pentose phosphate cycle (Calvin cycle)
osa_M00167
Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P
osa_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
4334316
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
4334316
Enzymes [BR:
osa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
4334316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
4334316
NCBI-ProteinID:
XP_015632189
UniProt:
A0A8J8YD96
Q10CS9
LinkDB
All DBs
Position
3:complement(32394975..32397257)
Genome browser
AA seq
299 aa
AA seq
DB search
MDAVAGASVSSSSARLRPCPRPRRIGNVAPATVRRRSRRRAVTCAAAADADVVGLFDAAK
LTVDRFVESGMVVGLGSGPASGLAIQYLGTRLRRGSLTGILGIPSSTISASEAVKAGIQV
SSYEEGTQIDFAFTDADIIEEDTMTAVIGRRKTESGEPSFMVEKGIVKSADKLAFIIGHE
KYVKGIEGSIPVLVKSANWIDTAEEIDDLFLGDAEVWRRPSIGTAGPLGGDFPLVTKEGH
HVLDVIFTTPIPDLGKVAESLEKIAGVVDHGIVSSIPSYVVVALNGEVQVLDEKSSVIP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgttgccggggcaagcgtgagctcctcttcggcgcggctccgcccgtgccca
cgcccccgccgcatcggcaacgtcgcaccggccaccgtgcgccgccgtagccggagacgt
gctgtgacctgcgcggccgccgcggacgccgacgtcgtcggcctcttcgacgccgccaag
ctcacggtggacaggtttgtggagagcggcatggtggtcgggctcggctccggcccggcg
tccggcctcgccatccagtacctcggcactcgcctccggcgagggtctctcactggcatc
cttggaataccctcgtccacgatcagtgcaagtgaggcagtgaaagcagggatacaggtc
agcagctacgaggaaggcacccaaattgactttgctttcactgatgctgatataattgaa
gaggacacaatgaccgctgtcattggccgtcggaaaacggagagcggagagccttctttc
atggtggagaagggtattgttaaatcagctgataaacttgccttcatcattggccatgaa
aaatatgtgaaaggcatcgaaggttcaattccagtcttggtgaaaagtgcaaattggatc
gacactgctgaagagattgatgacttgttcctaggagacgcagaggtatggaggcggcca
tcgattggaaccgctggtccattaggaggtgacttcccattggttaccaaggagggccat
catgtacttgatgttatcttcacaactcccatcccggatcttggtaaggtagcagaaagc
ttggagaaaattgccggtgtcgtggaccatgggatagtttccagcattccatcatatgtc
gtagttgcattgaacggggaagtgcaggtcttggatgagaagtcatcggtgataccatag
Oryza sativa japonica (Japanese rice) (RefSeq): 4335430
Help
Entry
4335430 CDS
T01015
Name
(RefSeq) probable ribose-5-phosphate isomerase 1
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00030
Pentose phosphate pathway
osa00710
Carbon fixation in photosynthetic organisms
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01200
Carbon metabolism
osa01230
Biosynthesis of amino acids
Module
osa_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
osa_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
osa_M00165
Reductive pentose phosphate cycle (Calvin cycle)
osa_M00167
Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P
osa_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
4335430
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
4335430
Enzymes [BR:
osa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
4335430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Sugar-bind
Motif
Other DBs
NCBI-GeneID:
4335430
NCBI-ProteinID:
XP_015633390
UniProt:
Q7XVP0
A3AS68
LinkDB
All DBs
Position
4:13802282..13803484
Genome browser
AA seq
275 aa
AA seq
DB search
MGSFASPLDAAPAPPTAKPSPPPAPAPANGLVTQEELKRVAAHRAVEMVEPGMTLGLGTG
STAAHALDRLGDLLRSGELAAVAGVPTSLKTEAHAARVGIPMLPLGEAGGIDLSIDGADE
VDPELNLVKGRGGSLLREKMIEGSGGRFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTL
GLVRKVFDGLPGFSARLRTVASKDGEGKEEMFVTDNGNYIVEMFFEDGIRGDLNEISDRL
LRITGVVEHGMFLGMATSVVVAKKDGTVALLHKKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttcgcctcccccctcgacgccgcccccgcccctcccaccgccaagccctcc
cctccgccggcgccggcgccggccaacgggctggtgacccaggaggagctgaagcgggtg
gcggcgcaccgggccgtggagatggtggagcccgggatgacgctgggcctcggcacgggc
tccaccgcggcccacgcgctggaccgcctcggcgacctcctccggtccggggagctcgcc
gcggtggccggcgtcccgacctcgctcaagacggaggcgcacgccgccagggtggggatc
ccgatgctgccgctcggggaggcgggcgggatcgatctgtccatcgacggcgccgacgag
gtcgacccggagctgaacctcgtgaaggggcggggtgggtcgctgctcagggagaagatg
atcgaggggtccgggggaaggttcgtcgtcatcgtcgatgagtccaagctcgtcccgcgg
ctcggctgtacgggcgccgtccccgtcgaggttgtccccttcgggtgcgaccacactctg
ggcctcgtccgcaaggtgttcgacggattgcctggcttcagcgcgaggctcaggacggtc
gcctccaaggacggcgaggggaaggaggagatgttcgtcaccgacaacggcaactacatc
gtcgagatgttcttcgaggatggcatacgcggcgacctcaacgagatcagcgaccgcctc
ctacggatcaccggcgtcgtcgagcacggcatgttcctcggcatggccacctcggtggtc
gtcgccaagaaggacggcaccgtcgccctgctccacaagaagaagtaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4342543
Help
Entry
4342543 CDS
T01015
Name
(RefSeq) probable ribose-5-phosphate isomerase 3, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00030
Pentose phosphate pathway
osa00710
Carbon fixation in photosynthetic organisms
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01200
Carbon metabolism
osa01230
Biosynthesis of amino acids
Module
osa_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
osa_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
osa_M00165
Reductive pentose phosphate cycle (Calvin cycle)
osa_M00167
Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P
osa_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
4342543
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
4342543
Enzymes [BR:
osa01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
4342543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
4342543
NCBI-ProteinID:
XP_015647995
UniProt:
A3BH42
Q6ZEZ2
LinkDB
All DBs
Position
7:complement(4068002..4070232)
Genome browser
AA seq
280 aa
AA seq
DB search
MAAATVSVRFHPAASAARCGGGSRRSRRLSGVIRAQSAPASAAAAALTQDDLKRLAAVRA
VEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGIVGVPTSKRTFEQAQSLGIPLSTL
DDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDETKLVTGLGGSG
LAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRLDEGGKPYVTDNSNYIVDLYFKTPIKD
ALAAGKEISALEGVVEHGLFLDMATSVIIAGTDGVSVKTK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccaccgtctccgtccgcttccacccggccgcatccgccgcgcgctgcggc
ggcggctcgcgccggagcaggcgcctgtccggggtcatcagggcgcagtcggcgccggct
tcggcggcggcggcggcgctgacgcaggacgacctgaagaggctggcggcggtgcgcgcg
gtggagcaggtggagagcgggatggtgctggggctggggaccgggtcgacggcggccttc
gccgtcgcggagatcggggcgctgctggcgtccgggaagctgagcggcatcgtcggggtg
cccacctccaagcgcacgttcgagcaggcgcagtcgctcggcatcccgctctccaccctc
gacgaccacccccgcatcgacctcgccatcgacggcgccgacgaggtcgatccagacctt
aaccttgtgaaagggagaggtggtgcccttctccgggagaagatggttgaggcagcatca
gacaagttcatcgttgttgttgacgagacaaagctagttaccggcttaggagggagtggt
ctagccatgcctgtggaggttgtgcagttctgctggaagtacaaccaagtgagattgcag
gatctgtttaacgatgaaggatgcgaggcgaagctgagattggatgaaggcggcaaaccc
tacgttaccgacaactcaaactacatcgttgatttatacttcaagacgccgatcaaggat
gcgttggcagcagggaaggagatctcagctttggaaggcgtcgttgagcatgggctgttc
ctggacatggcgacttcggtgatcatcgctggaacagatggcgtcagtgtcaaaacaaag
tga
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integrated database retrieval system