Oryza sativa japonica (Japanese rice) (RefSeq): 4341164
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Entry
4341164 CDS
T01015
Name
(RefSeq) zinc finger CCCH domain-containing protein 43
KO
K03260
translation initiation factor 4G
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4341164
03012 Translation factors [BR:
osa03012
]
4341164
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4341164
mRNA cycle factors
Stress granule specific factors
4341164
Translation factors [BR:
osa03012
]
Eukaryotic type
Initiation factors
eIF-4
4341164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
MIF4G
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
4341164
NCBI-ProteinID:
XP_015641849
UniProt:
Q5Z5Q3
LinkDB
All DBs
Position
6:19101400..19107075
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AA seq
711 aa
AA seq
DB search
MPQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCK
FGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMP
VPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKF
DHPDPGSDHEKWVVSSNANQVSSQVNIYSVLDHGESNEHTFTSEEVHQPGIPSFHQRISY
TRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRD
WHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCK
STLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDV
INLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITFKQALSNKCQEIFESAH
TVCSEIGKLIGQDREMEQRDKERVVKLETLGNINFIRALLKKKLITNKIIDHIVQAVMDC
CKFRFEPLGKVDLLNIIFEGMLDSDSAGDESNICVNAMIGGNKSSIASNDVEMTRKNVNR
QNEEAILQKSYDEVPNNKMDPQKNYADGAISYLIEKEKPTNLESSVRICRGGCSISEIME
LVVDAGAVEGSDEHFMATLLFIKPEYREIFLTLDTREGRLGWLKRMYKVKE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggacgatgactggttctgggggcgcccgactcccgtcgtcgtcggcgacggc
gagacgacgtcgaagccaaagccgccggtggcgggaaagacgaagaaggtggaggagcag
cacccacggcgaccgggggagccggactgcagctactacgtcaagttcgggagctgcaag
ttcggcatcagctgcgtgtacaaccacccggatccgaggccgcagcatggcgccgacgac
aagaagccggccgagcagttcccgcggcggcccggcgagcccgactgcagctactacgtc
aagttcgggagctgcaagtttgggatgaattgcaggttcaaccaccctccccgcatgcca
gtgccaccacaacaagagtatttctctgggaatgcatgccactgccaccatattgaaggc
aaaagtaaagttgagcaagtaaagctgaacgttcttgggcttccacttcgtcctgggaca
gggttgtgctcatactacatgaaccggggaatctgcaaatttggcactaactgcaagttt
gaccacccagatccaggctcagatcatgagaagtgggtcgtttcaagtaatgccaatcaa
gtttcctctcaggtgaacatttactcggtgcttgaccatggagaatcgaatgagcatact
tttacctccgaagaagtccatcagccagggattccaagttttcaccaacgaatcagttac
acaagggaccaacttctccaactttgtcagaatgtcgaagtgcccaaggacatcttaaaa
ttttgtcaagatattaatgttgaactgaatggtgaagataaaatttcgggatttggagca
gagaaagatcatgtacaaactccatcatataaacggtttgacgcgacagacagccgtgac
tggcattcatggtctgcacaaactaattgggaacagaaattttgggacaacttctctgaa
gcaaaagaaccctattctttaggttggaagcaagagaaatttaacaagcctgaccaatca
agcttccactttgattctaaagatcagtggttaaaatttataaagtgtacaccctgcaaa
agcactttaattaaggctgaagtccctttgtcaatccagagaggcattatctctggcaaa
gatgaagttctgaaaacattgaaaagtatactaaacacattttcaccaaagatgttcgat
cttcagaagggccagctaatagaaacaagaatctctagcgctgatattttgaaggatgtt
attaatcttatatttgaaaaggttgttgctgagccagccttctgttcgacgtatgcgcaa
ctttgcacatatctaaatcaaaacctcacaccattccctcctgaagactgtgattgtgaa
gaaattacgttcaaacaagcactgtcgaacaaatgtcaagaaatattcgaaagtgctcac
accgtatgttctgagattggcaaattgattggacaagaccgagagatggagcaacgggat
aaagaaagggtagtgaaacttgaaacactgggaaatattaatttcattcgagccctgctc
aagaaaaagttgatcacaaataagataatagatcacattgttcaggcagtgatggattgt
tgtaagtttcgctttgaaccacttggaaaagttgatttgctaaatataatatttgaaggc
atgctggattcagattcagcaggtgatgaatctaatatttgcgtcaatgctatgattggt
ggcaataaatcttccatagcttcaaatgatgtcgagatgactcgtaagaatgtcaatagg
caaaatgaagaggcaatattacaaaaatcttatgatgaagtcccaaataacaaaatggat
cctcagaaaaattatgcagatggagcaatcagttatctcattgagaaagagaagccaact
aacttagaatcatctgtgaggatctgtcgaggaggatgcagtatttcagagataatggag
ttagttgttgatgcaggagctgtggaaggcagtgatgagcatttcatggctaccttatta
tttattaaacctgaatatagggaaatatttcttacccttgatacacgtgaaggaagactt
gggtggctgaaaaggatgtacaaggtgaaggaataa
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