Oryza sativa japonica (Japanese rice) (RefSeq): 4342571
Help
Entry
4342571 CDS
T01015
Name
(RefSeq) tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00260
Glycine, serine and threonine metabolism
osa00400
Phenylalanine, tyrosine and tryptophan biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01230
Biosynthesis of amino acids
Module
osa_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
4342571
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
4342571
Enzymes [BR:
osa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
4342571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
FMN_dh
NanE
IGPS
TMP-TENI
Spore_YtrH
Ribul_P_3_epim
QRPTase_C
Motif
Other DBs
NCBI-GeneID:
4342571
NCBI-ProteinID:
XP_015644552
UniProt:
Q6ZL61
A0A0N7KN12
LinkDB
All DBs
Position
7:complement(4330418..4333650)
Genome browser
AA seq
329 aa
AA seq
DB search
MAFALKASTASAAAASTASASASSLSVAAAAPGRRGGAAGRVSFRGVPAPMVAIRAEAAA
VGEDERVISGTFAKLKEQGKTAFIPFITAGDPDLATTAKALKILDACGSDLIELGVPYSD
PLADGPVIQASATRALSKGTTFEDVISMVKEVIPELSCPVALFTYYNPILKRGIANFMTV
VKEAGVHGLVVPDVPLEETNILRSEAAKNNLELVLLTTPTTPTERMEKITKASEGFIYLV
STVGVTGARANVSGKVQSLLQDIKQVTDKAVAVGFGISTPEHVKQIAGWGADGVIIGSAM
VRQLGEAASPEEGLKKLEELAKSLKAALP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgcgctcaaggcctcaactgcctccgccgcggcggcgtccacggcctcggcc
tcggcctcgtccctgtccgtggctgcggccgcgcccgggaggcgcggcggcgcggcgggg
agggtctcgttccgcggggtccctgctcccatggtggcgatcagggcggaggcggctgcc
gtcggggaggacgagcgcgtcatctccggcaccttcgccaagctcaaggagcaggggaag
accgcattcattccattcatcactgctggtgaccctgacttggcgactacagcgaaagcg
ttgaagattcttgatgcttgtggttcggatctgatcgaattgggcgtgccttactctgac
ccattggctgatggccccgtcattcaggcttctgctacacgtgcactatcaaaaggcacc
acatttgaggatgttatctctatggtaaaggaggtgatacctgagctgtcctgccctgta
gcgcttttcacatattataacccgattctgaagcgtggcatcgcaaacttcatgactgtt
gtaaaagaagccggtgtccatggtcttgtggtacctgatgttcctctggaagagacaaat
attttgaggagtgaagctgctaagaacaaccttgagctggtgctactgacaacaccaact
acaccaacagaaagaatggagaaaattacaaaagcttctgaaggatttatttatcttgta
agcactgttggagttacaggtgcacgtgcaaatgtcagtggcaaggtgcaatctcttctc
caggatatcaagcaggtcacggacaaagctgtggctgttgggttcggtatatcgactcca
gagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcattgggagcgctatg
gtgaggcaattgggcgaagctgcttcacccgaagaaggattgaagaagctagaagagcta
gccaagagcctgaaggctgcattgccctga
DBGET
integrated database retrieval system
