Oryza sativa japonica (Japanese rice) (RefSeq): 4342601
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Entry
4342601 CDS
T01015
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4342601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4342601
Membrane trafficking [BR:
osa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
4342601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
4342601
NCBI-ProteinID:
XP_015647566
UniProt:
Q6Z4F3
A0A0N7KN19
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Position
7:4682485..4687647
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AA seq
387 aa
AA seq
DB search
MAGGGGGEGKVACAAWIRRREEKEKATRVFAAYGRAGSPPAVEVLGFDSKECSLSEPLAR
AELGEEPGDAPRGITVHPSGDELVCATAKGCRLFKLIFEEFTVRLISRDAPPLESVGPQK
CLAFSTDGSKFAIGGEDGHLRIFHWPSMNVLLDEPKAHKSFRDMDISLDSEFLVSTSTDG
SARIWKIDEGVPLVNLTRSADEKIECCRFSRDGMKPFLFCTVAKGNKVVTVVWNISDWSR
IGYKRLLGKPISTLSVSMDGKYLALGSHDGDFCAVDVKKMDVSHWSKKVHLGSPVSSIEF
CPTERAVISTSHQWGAELTKLNVPADWKEWQVWLILLSLFLVSAILFYMFYERSDSFWNF
PMGQHQPAKPWSVMKESPPVPEDQNPW
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcggaggtggcgaggggaaggtggcgtgcgcggcgtggatccggcgccgg
gaggagaaggagaaggcgacgcgcgtcttcgcggcgtacgggcgggcggggtcgccgccg
gccgtggaggtgctcgggttcgactccaaggagtgctccctctccgaacccctggcgagg
gcggagctcggggaggagccgggcgacgcgccgcgtggcatcacggtgcaccccagcggc
gacgagctcgtctgcgccacggccaaggggtgcaggctattcaagctgatttttgaagag
ttcactgttcgacttatttcaagagacgctccaccacttgaatccgttggaccgcagaag
tgtcttgcttttagcactgatggatctaaatttgccattggtggtgaggatgggcatctc
agaatatttcattggccgagcatgaatgtgctcttagatgaacccaaggctcataagtcc
ttccgggacatggatatcagcttagattcagaatttttagtttccacatccactgatggt
tctgcaagaatatggaagatagatgagggggtaccattggtcaatttgactcgatctgcg
gatgagaagattgaatgttgccgcttttctagggatggcatgaaaccattcctgttttgc
accgttgcaaaaggtaacaaagttgtaactgttgtctggaacataagtgactggagtcga
attggatacaagagacttctgggaaaacctatctccacactttcagttagcatggatggg
aagtatctggctttggggagccatgatggtgatttctgtgctgtggatgtaaagaagatg
gatgtttctcactggagcaagaaggtccatcttggttctccggtttcctcaattgaattt
tgtcctactgaaagggccgtaatctccacatcgcatcaatggggagcagagctgacaaag
ctgaatgtccctgctgactggaaagaatggcaagtctggctcatactcttatctcttttc
ctagtgtcagccatcctgttctatatgttctacgagcgctccgattccttctggaacttt
ccaatggggcagcatcagccagccaagccatggagtgtcatgaaggagtctcctccagtt
cctgaggaccagaacccctggtga
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