KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4346586
Entry
4346586           CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4346586
   04120 Ubiquitin mediated proteolysis
    4346586
  09126 Chromosome
   03083 Polycomb repressive complex
    4346586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4346586
   04121 Ubiquitin system [BR:osa04121]
    4346586
   03036 Chromosome and associated proteins [BR:osa03036]
    4346586
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    4346586
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     4346586
   Cul7 complex
     4346586
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     4346586
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     4346586
SSDB
Motif
Pfam: Skp1 Skp1_POZ TrbL_2
Other DBs
NCBI-GeneID: 4346586
NCBI-ProteinID: XP_015651381
UniProt: Q0J308 Q6H5Q8
LinkDB
Position
9:complement(5554220..5556384)
AA seq 167 aa
MAAANDGADAGDSKILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNV
LAKVLDYCKKHAAAAAAAAEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLL
DLACQHTADLIKGKTVQEIRDTFGIVNDFTPEEEEEIRKENEWAFEN
NT seq 504 nt   +upstreamnt  +downstreamnt
atggcggcagcaaacgacggagccgacgccggcgacagcaagatccttctgatcagctcg
gacgggcagcacttccaggtgacggaggcggaggcgagcatgtcgaagctagtgagcaac
atgatcgaggacgactgcacggagaacggcgtccctctccccaacgtcgcctccaacgtc
ctcgccaaggtgctcgactactgcaagaaacacgccgccgccgccgccgccgctgccgag
gacgtcgccgtgaaggatcaggagctgaagagcttcgatgccagcttcatcgatgtcgac
aacacgatgctgttcggcctgatcttggccgccaactacttgaacgtaccgtctctactt
gatcttgcgtgtcaacacacggctgacttgatcaagggcaagacggtacaggagatcagg
gacacgttcgggatcgtcaacgacttcacaccagaggaggaggaggagatccgcaaggag
aacgaatgggccttcgagaactga

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