Oceanicoccus sagamiensis: BST96_04795
Help
Entry
BST96_04795 CDS
T04832
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST96_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osg03019
]
BST96_04795
Enzymes [BR:
osg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BST96_04795
Messenger RNA biogenesis [BR:
osg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BST96_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ARN73492
UniProt:
A0A1X9NAM8
LinkDB
All DBs
Position
complement(1063882..1065297)
Genome browser
AA seq
471 aa
AA seq
DB search
MAKLFSNAIERVKGVLGKSTGSSDIDPNSIDPHIIPRDQHSISRKHISDAALRVMSTLRK
AGYEGFLVGGGVRDLLLGGRPKDFDIATDATPEQVNKLFRNSRIIGRRFKIVHVRFGREV
IEVTTFRGTHEQTEESTRGKRPKNQQSARSQNGMLLRDNVFGTVEEDAIRRDLTINALYY
TTADFAIYDYTHGLKDLENKVIRVIGDPETRYREDPVRMLRVVRFAAKLGFTIEPKTAAP
IYDLAPSLADIPAARMFDEVLKLFMSGRGVDVYNLMQEFGLFEPLFPQIQHSLEQEHYQR
LVLQALKNTDARIQQGKPVTPAFIYAALLWPAVSERQQQLLKEGVPAVPAMHQAAQEVVS
RQQQSTSIPKRFGMPMREIWDMQLRLPRRGGRKAEQLMENRRFRAAYDFLLLREQAGEET
DNLGQWWTDYQNRSPDQRAAMTEKLQDKRSKRRRPRKKPRQSSGSDSQFTE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttgttctccaacgcaattgagcgagtcaaaggcgtgctcggtaagagtaca
ggctccagtgatattgaccctaattctatagatccgcatatcattccccgcgaccagcac
agtatttcccgcaaacatattagcgatgccgctctgagagtgatgagcaccctgcgcaaa
gccggttatgagggttttctggtgggtggtggtgttcgggatttgctattgggtgggcgc
cccaaagattttgatattgccaccgatgcgacccctgagcaggtgaataagctatttcgc
aactcccgtattattggccgccgttttaaaattgttcatgtgcgctttggtcgtgaagtg
attgaggtgaccaccttccgtggtacccatgaacagactgaagagagcaccaggggtaaa
aggcctaagaaccagcaatctgcccgctctcaaaatggcatgctattaagggataatgtt
tttggcaccgtagaagaagatgctattcgccgtgatctgactatcaatgccttgtattac
accaccgctgactttgccatttatgattacactcatggcttaaaagaccttgaaaataag
gtgattcgggttattggtgatcctgaaacccgttaccgggaagacccggtaagaatgctg
cgggtggtgcgttttgctgccaagctggggtttaccattgagccgaaaaccgcagcgcca
atctatgatttggccccctcgctggccgatataccggcggcacgtatgtttgatgaggtg
ctgaaattatttatgtccggccgcggtgtcgatgtctataacttaatgcaggagtttggt
ttatttgagccgctattcccgcaaatacagcatagcctggagcaagagcactatcagcgc
ctggtgttacaagccttaaagaataccgatgcccgtatccagcagggtaagccggtaacc
cccgcgtttatctatgctgctctgttatggcccgcggtcagtgagcggcagcagcaatta
ctcaaagagggggtgcccgccgtacccgctatgcatcaagctgcacaggaagtggtgtcg
cggcagcagcaatcgacctccattcccaagcgctttggtatgccgatgcgagagatctgg
gatatgcagctacgcctgccacgacgtggcggtcgcaaggcagagcaattgatggaaaat
cgtcgctttcgtgctgcttatgacttcttgctattgcgggagcaggcgggtgaggaaacc
gataatttggggcagtggtggacagactaccaaaaccgcagtccggaccagcgcgctgcg
atgacagagaagttgcaggacaaaagaagcaagcgccgccgcccccgcaaaaaacccagg
cagtcgtcgggctctgattctcaatttaccgagtaa
DBGET
integrated database retrieval system
