Odoribacter splanchnicus: Odosp_1553
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Entry
Odosp_1553 CDS
T01428
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
osp
Odoribacter splanchnicus
Pathway
osp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Odosp_1553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osp03021
]
Odosp_1553
Transcription machinery [BR:
osp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Odosp_1553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_38
HTH_11
PP1
Sporozoite_P67
HTH_7
HTH_24
HTH_28
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADY32582
UniProt:
F9Z4H2
LinkDB
All DBs
Position
complement(1833197..1833751)
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AA seq
184 aa
AA seq
DB search
MEGVTLDMERFRQGDSLIFKTVFDGLYHSLCLFTNRFLNNLDASEDIVQEAFCALWNHRE
EMESVIHIKSFLYSVTRNTVLNYIKHQKIRLRYEQSLHDLEDKTLFEYFIIEEEVERILL
KTQENLPPKCKRIFILAIQGKNNDEIAKELNISVNTVKTQKKIAYRTLKDYIYEITCLLF
LLQK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggtgtgacattggatatggaacgtttcaggcaaggagatagcttgattttcaag
accgttttcgatggtctgtatcattcgttgtgcctttttaccaaccggtttttaaataat
ctggatgcttcagaagatattgtgcaggaagccttttgtgcactttggaatcatcgggaa
gaaatggaatcagttatacacattaaatctttcctttattccgtgacccgcaatactgtc
ttgaattatataaaacatcaaaaaatcaggttacgttacgagcagagtttgcacgattta
gaagacaaaactttattcgaatatttcattatagaggaagaagtggagcggatattgctt
aaaacccaggaaaatcttccgcccaaatgtaaacgaattttcattcttgccatacaaggc
aaaaacaatgatgagattgccaaagaactgaatatttctgtcaataccgtaaaaactcag
aaaaaaatagcctacagaacgctcaaagactacatttacgaaatcacctgcctgctcttt
ttgcttcagaaatga
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