Odoribacter splanchnicus: Odosp_3305
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Entry
Odosp_3305 CDS
T01428
Name
(GenBank) Alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
osp
Odoribacter splanchnicus
Pathway
osp00300
Lysine biosynthesis
osp00470
D-Amino acid metabolism
osp00550
Peptidoglycan biosynthesis
osp01100
Metabolic pathways
osp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
osp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Odosp_3305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Odosp_3305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Odosp_3305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Odosp_3305
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
osp01011
]
Odosp_3305
Enzymes [BR:
osp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Odosp_3305
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Odosp_3305
Peptidoglycan biosynthesis and degradation proteins [BR:
osp01011
]
Precursor biosynthesis
Amino acid ligase
Odosp_3305
Racemase
Odosp_3305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ADY34264
UniProt:
F9Z9J7
LinkDB
All DBs
Position
3930871..3933348
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AA seq
825 aa
AA seq
DB search
MFRVNETKCMFSSKEILRILDCKACEVKDFEITEVSVDSRSVNKPESTLFFALKGINHDG
HDYVEKLYEQGVRNFVVTGLRAGFLPLSGANFFVVDEVLPALQQLAAWFRGQMKAEVVGI
TGSNGKTIVKEWLYQLLSDEPGIYRSPRSYNSQVGVPLSLLGMDVSTRLAIIEAGISLPG
EMGKLQAMIRPEIGIFTHLGDAHGENFESRQQKLAEKAILFRDCRCIIGREGEALDYIAS
RLRPDVKKMIWGSGKNATVRVEEKGSTAHERLVAVGYEHVAFTLSIPFPDEASFENCMNA
VCVLLLEGISPVFIAERVARLQPLAMRMEIKDGINRCVLINDYYNSDAASFQLALNTLAM
QDAGREKVVILSDFVDTGTGERELYREVALLLRKAKVSLFIGIGEKLSRYKPYFLVPRCR
FYKDTDSFLRQENREQFKDQVILIKGARKFRFEYIAGFLQKQSHATVLEVDFDAMVHNLN
YFRSLLPRKTMIAVMVKAFSYGSGAGEVASLLQYQGVNYLMVAFADEGVELRAAGITIPI
GVMNPEPEAFDHMIEFNLEPEIYSLELLEAFDRVLTKHGIEKYPVHLKLNTGMNRSGLDP
EDLPALLKFFETKRKVIIRSMFSHLAGSDEARHDEYTLFQINRFIEMTKEVQARFDYPII
RHILNSAGIERFGQYAFDMVRLGIGLHGISAVGAPLWPVSSFKTYIAAVRQVKGDQTVGY
GRKGVLGRDTRIAVIPVGYADGLDRHLSCGVGEVWIGGQRVPIVGNICMDACMVDITDTD
AQVGDEVEIFGKHISVTELSDKLGTIPYEILTSVSLRVKRIYFKD
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagtgaatgaaacgaagtgtatgtttagtagtaaagaaattttaaggatcttg
gattgcaaagcctgtgaggtaaaggactttgagattacagaagtaagcgtggatagccgg
tcggtgaataaacccgagtcgactttattttttgctttaaaaggaattaatcatgatgga
catgattatgtagaaaaattgtatgaacagggggtaaggaattttgtggtaaccgggctg
agagcgggttttcttcctttgtccggggctaatttttttgtcgtcgatgaggttttaccg
gcacttcagcaattggcagcctggtttcgcggtcaaatgaaggctgaagtggtcggtatc
accgggagtaatggaaaaacgatcgtcaaagaatggttatatcagttattatcggatgaa
ccgggtatttatcgcagtccccgtagttataattcacaggtcggagtccctttgtctttg
ttgggtatggatgtttctacccgtttggccatcattgaagccggaatctctctgccggga
gagatgggtaagttgcaggcaatgatccggcctgagatcgggatttttacgcatttggga
gatgcgcatggagagaattttgaatccagacaacagaaattagcggagaaagccatattg
tttcgggattgccgttgtattatcggaagggaaggggaggctttggactatatagctagc
cggcttcgaccggatgtaaaaaaaatgatctggggaagtgggaaaaatgcaactgtccgg
gttgaagagaaagggagcactgcccatgaacgcctggtagccgtcggatatgagcatgtt
gcgtttactttgtctataccgttcccggatgaagcttcttttgaaaattgtatgaatgcc
gtatgtgttttattgctggaagggatttctccggtttttatcgccgaacgggtagcccgt
ttgcagcctttggcgatgcggatggaaataaaagacggtataaatcgttgtgtattgatc
aatgactactataattcggatgccgcttcgtttcagttggcattgaataccctggctatg
caggatgccgggcgtgagaaagtcgtgattttgtctgatttcgtggatacaggaaccggt
gagagagagttgtaccgggaggtagcgttgttgttgcgaaaggcgaaggtttctttattt
ataggtatcggggaaaagttaagccggtataaaccttattttttggtcccccgctgtcgt
ttctacaaggatacggatagtttcctgcgccaagagaacagggagcagtttaaagatcag
gtgattctgattaaaggtgcccgtaagttccgtttcgaatatatcgccggttttttacag
aaacagtcccatgctaccgtgctcgaagttgatttcgatgcaatggtgcataacctgaat
tatttccgttctttgttgccccggaagacgatgatcgctgttatggtcaaagctttttct
tatgggagcggagccggggaagtagcgagtttgttacaatatcagggggtaaattacctg
atggtggcttttgcagatgaaggagtagagttaagagctgccggaataaccatacctatc
ggtgtcatgaatcctgaaccggaggctttcgatcatatgatcgaatttaatctggaaccg
gagatttattctctcgaattactggaggctttcgaccgggtcctgaccaaacatggcata
gaaaaatatcctgtacatttgaaattgaataccgggatgaatcgttccggcttggatccg
gaagatctgcccgctttgctgaagtttttcgaaacgaaacggaaagtcataatccgttcc
atgttttcacatttggccgggagtgacgaagcccgacacgatgagtatacgttgttccag
atcaaccgttttattgaaatgacgaaagaagtccaggcccgtttcgattatccgattatc
cggcatattctcaactccgccggaatagaacggttcggacagtatgctttcgatatggtc
cgtttgggtatcggattacatgggatcagtgccgtgggggcaccgttatggcctgtcagt
agctttaagacctatattgcggcagttcgtcaggtgaagggagatcagacggtaggatac
ggacggaagggtgtattgggccgggatacccgtattgccgttattcctgtcggctatgcg
gatgggctcgaccgccacctgagctgcggagtcggtgaagtatggatcggaggacaaaga
gttcccattgtcgggaatatctgcatggatgcctgtatggtggatatcaccgatacggac
gcacaggtcggggatgaggtggaaatattcggaaaacatatttcggtgaccgagctttcc
gataaattaggtacgatcccctatgaaatattgaccagcgtgtctctccgcgtgaaacga
atctattttaaagattaa
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