Ostreococcus tauri: OT_ostta02g02290
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Entry
OT_ostta02g02290 CDS
T01358
Name
(RefSeq) RNA polymerase, beta subunit, conserved site
Organism
ota
Ostreococcus tauri
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
9832753
NCBI-ProteinID:
XP_022840753
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Position
2:complement(466647..470322)
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AA seq
1190 aa
AA seq
DB search
MRVGTLPSREINFSNLSPPPGPGFALWLTAAVRAGSSETVRAYQDQDIFNMPYTDHDVGV
QARRMDHLRRTEKQSVDDISRVVSIKKLFHCHVDSFNHFVNSGLSDIVRGVESQHISVGP
GSRQVDIWLEDLKIESLRSKVSAVATSSSQTPRSCREVGETYKTSMSVSYCWRLQGNDAM
QRRVVQLGQCPVMVQSNVCSLARLCPAELVAFGEEANEAGGYFIINGIERMIRMIIMQRR
HHILGLRRRAFLKRSPLFTEYATVMRCVSNDEHSSTIRLHYMRNGSLKVAFQHRREEFFI
PAGLVLRSLVACSDAELHERACMELLGTSSHEETFVKERLAIIQEECQSLYIFTQISALS
YLGQHFRTLLEASASESDAAVGERFLRDTIFIHLSRNGDKLSLLLLMMNKLLTLVTGGCG
PDDPDSLVNQEVLLPGLLLQKIVREKIQISFQKVLTQIRGLDCRINEDIGRVIDETASLD
IGKALEYILATGNLVSPTGLGLSQASGFTIVAEKLNYFRYLSHFRSVHRGAYFMELRTTA
VRKLLPESWGFLCPVHTPDGSPCGLLNHLTEMCEVVVPDKDPLVRSERLDLIKSKLAWAL
VDAEHRSRFHHSVPVIVEGVHMGYISIADVERAVAALREAKTGSQLSLQMTEICHIPVHG
EHGLFPGLYIFYGPSRLMRPVQQVHTGKIELVGTLEQSFLSICSLRKEMNDIFTHSELKM
TSALSCIASLTPWSDFNQSPRNMYQCQMAKQTMGTPMHSICFRSDTKLYRLHTPQRPVAL
TYTYDKYALDNYALGTNAVVAVLAYTGYDMEDAMILNKGSLTRGFAHATLYKTIVETASK
HELIGMNASQSRTNEHIDSFGTVDVGSVASPGSTVLRVNNGEGLTKSRQIRIKGTDPAVV
DRVVLTSTTQKGNQNVKRAAITFRYDRNPVIGDKFSSRHGQKGVLSFLWPEEDMPFCERT
GVRPDVIINPHAFPSRMTIGMLVESLASKAGAMAAVFADATPFKRDKKYSSPAERYGSLL
REHGYNFCGNESMINGYTGESFSVDIFIGIVYYQRLRHMVSDKFQVRSTGPNNPLTKQPI
KGRKSGGGIRFGEMERDSLLAHGAAYLLRDRLNMCSDNQDTWVCKVCGSLLAPLTMCMAT
SCGEKYASQRTRCRVCESNTSVEIVSVPHVFIYLATELAAMNISIQLKAR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagggactctcccaagccgtgagataaatttttccaatttatccccgccgccg
ggacccggcttcgccctttggttgacggcagctgtccgcgctggaagttcagagactgtc
cgagcttatcaagaccaggatatctttaacatgccatacactgatcatgatgtaggggtc
caggctagacgcatggaccacttgagacggacagaaaagcagtctgttgacgatatttcc
cgggtagtatctatcaaaaaactgtttcactgccacgtagattcatttaatcatttcgtc
aactcaggattaagtgatattgtgcgtggtgtggagagtcaacatatttcagtaggacct
ggatcgcgacaggtcgatatatggttggaagacttgaagattgaatcgctgaggagcaaa
gtgagtgctgtggcaacgtcgtcttcacaaacacctagatcgtgccgtgaggtgggcgaa
acgtacaagacatcgatgtcagtatcatattgctggcgattacagggtaacgatgctatg
caacgacgcgttgtgcagcttggtcagtgtcctgtgatggtacagtcaaacgtgtgctca
cttgcccggctctgcccagcagagttggtagcgtttggtgaagaagcaaatgaggctgga
ggatatttcatcataaatggcattgagcgaatgattcgtatgatcataatgcaaagaagg
catcatattcttggacttcgtagacgagccttcctgaaacgttcaccacttttcaccgag
tacgcgactgttatgcgatgcgtgagcaacgatgagcactcttctacaattcgcttacat
tatatgcgcaatggttcgttaaaagttgctttccaacatcgtagagaggaattctttatc
ccagctggcttagtcctacgctcacttgtggcctgttcagatgctgagctgcatgaacga
gcatgtatggaactactaggtactagcagtcatgaggagactttcgtgaaggaacgcctt
gccattattcaggaagaatgtcaatcgctttatatatttacacaaattagtgcgctatcg
tacttgggacagcatttccgcactctcctagaagcttccgcaagtgaaagtgatgctgct
gtcggggaacgcttcttgcgtgatactatttttattcatctgtctcgcaatggagacaaa
ctctcgttgttactgctcatgatgaataaattactcacgctcgttaccggaggctgtgga
ccggacgatcctgattcactcgtgaatcaagaggttttgcttcctggcctccttctccag
aaaattgttcgtgaaaagatacagatatctttccagaaggtgctcactcaaataaggggt
ttggactgtcgaatcaacgaggacataggtcgagtcattgatgagactgcgtccttagat
attggtaaagcccttgaatatatcctggcaactggtaacctagtcagtccaacaggcttg
ggcctgagccaggcaagcggtttcacaattgttgcggagaaactgaactacttcagatat
ctgtctcattttcgctcggttcacaggggagcatattttatggaactacgaacgacggcg
gttcggaagctactacctgaatcatggggcttcttgtgtccagttcatactccagacggc
tcaccctgcggtctgttgaaccatctcacagaaatgtgcgaggtcgtcgtacccgataaa
gatccgctagtccgttcagaacgactggatcttatcaagtcaaagctagcctgggctttg
gtagatgcagagcatagaagtagattccatcatagtgtgcctgtcatcgttgaaggagtt
cacatgggctacatttcaattgctgacgttgagcgagccgtggccgctctgagagaagcg
aaaactggatcccagctctcgcttcaaatgacagaaatttgtcatatccccgtacacggt
gagcatggtttgtttccgggcctgtatattttctatggtccctcaaggctaatgaggccg
gtgcagcaagtgcatactggcaaaattgaactcgttgggacgttggaacaatcttttcta
tcaatttgctcgctcagaaaagaaatgaatgatatcttcacgcattcagaactgaagatg
acttctgcattgagttgtattgcaagcctgactccatggtcagacttcaatcagagtcct
cgcaacatgtatcagtgtcagatggctaaacaaaccatggggacgcccatgcatagtatt
tgctttcggagtgacactaagctttatcgattgcacactccacagcgcccagtagcgctt
acttatacgtacgacaagtacgctctggacaattatgcacttggtacaaacgctgttgtt
gcagtcctggcatatacagggtatgatatggaagatgctatgatattgaacaagggctca
cttactcgcggctttgcacacgcaacgctgtataaaactatcgtcgagactgcctcaaag
cacgagttaatcggtatgaacgcttcgcaatcacgcaccaatgagcacatcgacagtttc
ggtacagtcgatgtcggttccgttgcgtcacccggatccacagtgctgagggtgaataat
ggcgaagggttgacgaaatctcgacaaatacgtataaagggcacagatccggccgttgtc
gatcgtgttgtgttgacttctacaactcaaaagggaaatcagaatgttaaacgtgcagca
ataacttttcggtatgatcggaatccagtcataggtgataagttcagcagtcggcacggg
cagaaaggtgtccttagtttcctatggcccgaggaagacatgcctttttgcgaacggaca
ggtgttcgccccgatgtcatcattaatccacatgcctttccctcccgcatgacaattggc
atgctagttgaaagtttggcttcgaaagctggagccatggctgccgtattcgctgatgca
acaccgtttaaacgggataaaaagtactcttctccagcagagcggtatggtagcttgtta
cgagagcatggttataacttttgtggtaacgagtctatgatcaacggttacactggggag
agcttcagcgttgatattttcattggcattgtgtactatcaacgtcttcgtcacatggtg
agtgataagttccaagtgcgctccactggaccaaataatccgcttacaaagcagcccatc
aaaggaagaaaatctggtggtgggattcgatttggggaaatggagcgcgactcacttctc
gctcatggcgctgcatacttgctgcgtgatcgactgaatatgtgttcagacaatcaagat
acttgggtgtgcaaggtgtgcggtagtttactcgccccacttaccatgtgtatggcaaca
agttgcggtgaaaagtatgcatcgcaaagaacgagatgcagagtttgcgagtctaatacc
tctgttgagatagtttctgttccgcacgttttcatctatcttgcaactgagctcgccgca
atgaacatatcgatacaactgaaagcccgttga
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