KEGG   Octadecabacter temperatus: OSB_20490
Entry
OSB_20490         CDS       T04001                                 
Symbol
rnjA
Name
(GenBank) Ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
otm  Octadecabacter temperatus
Pathway
otm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:otm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OSB_20490 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otm03019]
    OSB_20490 (rnjA)
Messenger RNA biogenesis [BR:otm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OSB_20490 (rnjA)
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: AKS46588
UniProt: A0A0K0Y6I7
LinkDB
Position
complement(2004997..2006649)
AA seq 550 aa
MYLPLGGAGEIGMNCYVYGYGPADAERLIVVDLGVTFPDMDGTPGVDLILPDVSWLEERK
NQIEAIFITHGHEDHVGAVGHLYERLGAPIYARAFTANLARRKMSEHGYSDKTVKTVGKW
PETVKAGPFEVGFVPISHSIPESSGLVIDSKGGRIVHTGDFKIDVNPGIGEPFDHDLWES
LGKDGVKALVIDSTNVFSREEGRSESTVGPEIERFLKEATGMVAATTFASNVSRVRTIAQ
AADRAGRSVCLLGRSMRRMVEAATEVGILDDFPTVISPEDVGSMPRENVLLLVTGSQGER
RAASAQLANGKYMGLTMKEGDTFLFSSKTIPGNEKGVIHIMNQFSELGVDVVDDSSGGLY
HVSGHANRPDLDVMRDLIKPQTVIPMHGEHRHLREHVKVAETAGVQGVLAVNGMMIDLSG
NKPKVVEHIETGRMYLDGSVKVGQFDGVIRDRIRMALNGHVLVTLIIDENGDPLGDPWCE
VSGLSEMGRNNAPLVDVLEEDLSQFLGRADDKTIADDVRLEKELRTVTRKSAQGEIGKKP
EVTIVISRLA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgtatctccccctcggtggcgcgggcgagatcggtatgaattgttatgtctacggctat
ggccctgcggatgcagaacgcctgatcgtcgtggaccttggggtcacgttccccgatatg
gacggcacacctggcgtggatttgatcctgccagacgtaagctggcttgaagaacgcaag
aaccagattgaagcgatctttattacccacggccacgaagatcacgttggcgctgtcggg
cacctttacgaacgccttggcgcgccgatttatgcgcgtgcgttcacggccaaccttgca
cgccgcaagatgtccgaacacgggtattccgacaaaacggttaagaccgtcggcaagtgg
cctgaaaccgtgaaggcgggtccgtttgaagttggtttcgtgccaatctcacactctatc
cctgaaagctccggtcttgtgatcgacagcaagggcgggcgcattgttcacacaggcgat
ttcaaaatcgacgtgaaccccggtattggtgagccgttcgaccacgatctttgggaatcc
cttggcaaagacggcgttaaggcgctggtgatcgattccaccaatgtgttttcccgcgaa
gaggggcgctcggagtccactgtcggacctgagattgaacgtttcttgaaagaagccaca
ggcatggtagccgcgacaacattcgcgtctaacgtcagccgtgttcgcacgatcgcacag
gcggcggaccgtgcgggtcgttccgtgtgtttgttgggccgttccatgcgccgcatggtc
gaagccgcgactgaagtcggcattctggatgatttcccaacggtgatttcaccagaagac
gttggcagcatgccgcgtgaaaacgtgttgctgttggtcaccggatcgcagggcgagcgc
cgtgcagcgtccgcgcaattggcgaatggcaagtacatggggctgacgatgaaagagggc
gacacgttcctgttctcttccaaaaccattcctggaaacgagaagggcgtcatccatatt
atgaaccaattcagtgagttgggcgttgatgtcgtcgacgattccagtggcggactttac
cacgtttccggccacgcgaaccgtcctgatctggacgtcatgcgtgatcttatcaaacca
cagaccgtgatcccaatgcatggtgaacaccgtcacctgcgcgaacacgtcaaagtcgcg
gaaaccgctggcgtgcagggcgtgctggctgtgaacgggatgatgatcgatttatctggc
aacaaaccaaaggtggttgagcacatcgaaaccggccgcatgtatctggatggctccgta
aaggtcggccagtttgacggcgtgatccgcgaccgtatccgtatggcgctgaacggccat
gtgctggtgacgttgatcatcgatgaaaacggcgacccgcttggcgatccgtggtgcgaa
gtgtccggtctgtccgaaatgggccgcaacaacgcgcctttggtggacgtgttggaagaa
gacctgagccagttcttgggtcgtgctgacgacaagacgattgcggatgatgtgaggctt
gaaaaagagctgcgcaccgtaacccgcaaaagcgcccaaggtgagatcggtaaaaagcca
gaagtgacgattgtgatttcacgtctggcttaa

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