Octadecabacter temperatus: OSB_31500
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Entry
OSB_31500 CDS
T04001
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
otm
Octadecabacter temperatus
Pathway
otm00540
Lipopolysaccharide biosynthesis
otm01100
Metabolic pathways
otm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OSB_31500 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
otm01005
]
OSB_31500 (kdsB)
Enzymes [BR:
otm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
OSB_31500 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
otm01005
]
Lipid A
OSB_31500 (kdsB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
ADH_zinc_N
IspD
DUF2064
NYN_YacP
DUF374
Motif
Other DBs
NCBI-ProteinID:
AKS47663
UniProt:
A0A0K0Y9N3
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Position
complement(3079059..3079859)
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AA seq
266 aa
AA seq
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MGVLVVIPARFASTRYPGKPLVELRGASGDAKSLIQRSWEAAQNVTGVDRVVVATDDERI
KDAAEAFGAEVVMTSTECQNGTERCAEALDTLGGGYEIVVNLQGDAPLTPAWFIEDLVAG
LTAHPVAEVATPVLRCDGRALNGLLDDRREGRVGGTTAVFGADHNALFFSKEVIPYTGMA
YCDDDETPVFHHVGVYAYRPSALAAYPRWASGPLEHLEGLEQLRFLERGAHMLCVEVEAR
GRQFWELNNPEDVSKIEAMLSEMGHN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcttgtcgtcattccggctcgcttcgcgtctacgcgctacccaggtaagcca
ctggtagaactgcgtggtgcaagtggagacgccaaaagtttgatccagcgatcttgggag
gccgcccaaaacgtgacaggcgtcgaccgcgtcgttgtcgcaacggatgatgagcgcatt
aaagacgcggccgaggcgtttggcgcggaggtcgtgatgacttcaacagagtgccaaaac
ggaacagagcgttgcgcagaagccttagataccttgggcggtggttacgaaatcgttgtg
aacttgcagggcgatgccccgctaacgcccgcatggtttatcgaagacttagttgctggg
ttgaccgcacaccctgtcgccgaagtcgcaacgcctgtgttgcggtgtgacggacgtgcg
ctgaatggtttgctagatgatcgccgcgaaggtcgtgtaggtggcacaactgctgtgttt
ggcgccgaccacaatgcgttgttcttctcaaaagaagtcatcccttacactggtatggct
tattgcgacgacgatgagacacctgttttccatcatgttggtgtatatgcctatcgccct
tctgcattggccgcgtatccgcgctgggcgtctggtccgcttgagcatctagaaggtttg
gagcagctgcgttttcttgaacgcggcgcacatatgctgtgtgtcgaagttgaagcacgt
ggtcgtcaattttgggagctaaataacccagaggatgtatccaaaattgaggccatgctg
tctgaaatgggccacaactga
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