Oryzomicrobium terrae: OTERR_05380
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Entry
OTERR_05380 CDS
T06190
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OTERR_05380 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otr01007
]
OTERR_05380 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otr03016
]
OTERR_05380 (aspS)
03029 Mitochondrial biogenesis [BR:
otr03029
]
OTERR_05380 (aspS)
Enzymes [BR:
otr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
OTERR_05380 (aspS)
Amino acid related enzymes [BR:
otr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OTERR_05380 (aspS)
Transfer RNA biogenesis [BR:
otr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OTERR_05380 (aspS)
Prokaryotic type
Other AARSs
OTERR_05380 (aspS)
Mitochondrial biogenesis [BR:
otr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OTERR_05380 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEL64014
UniProt:
A0A5C1E5N4
LinkDB
All DBs
Position
complement(586137..587927)
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AA seq
596 aa
AA seq
DB search
MRSHYCGQLNASLEGQIVTLCGWAHRRRDHGGVIFIDLRDREGMAQVVCDPDRPEMFATA
ESVRNEFCLKITGKVRLRPAGTENKNLASGEIEILCQEIEVLNASVTPPFQLDEDNLSEN
VRLTHRVIDLRRPQMQKNLLLRYAVARAFRRFLDANGFIDVETPMLTKSTPEGARDYLVP
SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFM
GEAEITALMEQLIRVVFKEAMDVELPNPFPRMTYGEAMARFGSDKPDLRVTLELVDVTDA
VADVAFKVFSGPATSGGRVAALRIPGGSTLTRSEIDAYTQFVGIYGAKGLAYIKVNDAAQ
PNEAGLQSPIVKNLHEQALKTILERTGAQNGDLIFFGADKTKVVNDALGALRIKIGHEKG
YVNGKAWEPLWVVDFPMFEYDEEDKRWTACHHPFTAPKDEHLEFLTSDPGKCLAKAYDLA
LNGWEIGGGSVRIHRADVQEKVFAALGIDEEEAQLKFGFLLDALKYGAPPHGGLAFGLDR
IVTMMTGAESIRDVIAFPKTQRAQCLLTNAPSAVDEKQLRELHIRLRNVVKAEGAA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctcactactgcggacaactcaacgcctccctcgaaggccagatcgtcaccctg
tgcggctgggcccaccgtcgccgtgaccacggcggcgtcattttcatcgacctgcgcgac
cgggagggcatggcccaggtggtgtgcgatccggatcgcccggaaatgttcgccaccgca
gagtcggtgcgcaatgagttctgcctgaagatcaccggcaaggtgcgcctgcgcccggcc
ggtaccgagaacaagaatctggcctccggcgagatcgaaatcctctgccaggagattgag
gtgctgaacgcctcggtcaccccgccgttccaactcgacgaggacaacctctccgagaac
gtgcgcctgacccaccgggtgatcgacctgcgccgcccgcagatgcagaagaacctgctg
ctgcgctacgccgtggcccgggccttccgccgcttcctcgacgccaacggcttcatcgac
gtggaaaccccgatgctcaccaagagcaccccggaaggcgcccgcgactacctggtgccc
tcccgcgtccatgacggccagttcttcgccctgcctcagtcgccccagttgttcaagcag
ctgctgatggtggctggcttcgaccgctactaccagatcaccaagtgcttccgcgacgag
gacctgcgcgccgaccgccagcccgagttcacccaggtcgatatcgagacctcgttcatg
ggtgaagccgagatcaccgccctgatggagcagctgatccgcgtggtgttcaaggaggcc
atggacgtggaactgcccaacccgttcccgcgcatgacctacggcgaggccatggcccgc
ttcggttccgacaagcccgacctgcgcgtcaccctggaactggtggacgtcaccgacgcc
gtcgctgacgtggctttcaaggtcttctccggcccggccacctccggcggccgcgtcgcc
gccctgcgcatccccggcggcagcaccctgacccgctccgagatcgacgcctacacccaa
ttcgtcggcatctacggcgccaaggggctggcctacatcaaggtgaacgacgcggcccag
cccaacgaggccggcctccagtcgcccatcgtcaaaaacctgcacgagcaggccttgaag
accatcctggagcgcaccggcgcccagaacggcgatctgatcttcttcggcgccgacaag
accaaggtggtcaacgacgccctcggcgccctgcgcatcaagatcggccacgagaagggc
tacgtgaacggcaaggcctgggaacccctgtgggtggtggacttccccatgttcgagtac
gacgaggaagacaagcgctggaccgcctgtcaccacccgttcaccgcccccaaggacgag
cacctcgagttcctcaccagcgatcccggcaagtgcctggccaaggcctacgacctggcc
ctcaacggctgggaaatcggcggcggctcggtgcgtatccaccgcgccgacgtgcaggag
aaggtctttgccgccctgggcatcgacgaggaagaagcccagctcaagttcggtttcctg
ctcgacgccctcaagtacggcgcaccaccccacggcggcctggccttcggcctggaccgg
atcgtcacaatgatgaccggtgccgagtcgatccgggacgtgatcgccttccccaagacc
cagcgcgcccagtgcctgctcaccaacgctccctcggcagtggacgagaagcagctgcgc
gagctgcacatccgcctgcgcaacgtggtcaaggccgaaggcgccgcctaa
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