KEGG   Oryzomicrobium terrae: OTERR_07610
Entry
OTERR_07610       CDS       T06190                                 

Gene name
holC
Definition
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
otr  Oryzomicrobium terrae
Pathway
otr03030  DNA replication
otr03430  Mismatch repair
otr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:otr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OTERR_07610 (holC)
   03430 Mismatch repair
    OTERR_07610 (holC)
   03440 Homologous recombination
    OTERR_07610 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:otr03032]
    OTERR_07610 (holC)
   03400 DNA repair and recombination proteins [BR:otr03400]
    OTERR_07610 (holC)
Enzymes [BR:otr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OTERR_07610 (holC)
DNA replication proteins [BR:otr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OTERR_07610 (holC)
DNA repair and recombination proteins [BR:otr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OTERR_07610 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: QEL64237
UniProt: A0A5C1E7H0
LinkDB
Position
complement(837791..838237)
AA seq 148 aa
MAMPRVDFYHNAPDRLAVAVKLAHKSFANRLALVVIAPEERQAQAFDRQLWSLPPLAFTP
HCRAESPLASETPIIIARHLGELPAHLRASLLLNLGQAVPEGYERFERILEIIGQDADER
LPGRERVGHYKQAGCTVNFHDLGQQRAN
NT seq 447 nt   +upstreamnt  +downstreamnt
atggccatgcctcgggtggatttctaccacaacgccccagatcgcctggcggtggcggtg
aagcttgcgcacaagagcttcgccaatcgcctggcactggtggtgattgcgcccgaggaa
cgccaggcacaggccttcgaccggcagctgtggtccctgccgcccctcgctttcaccccc
cattgccgcgccgaatcccctctggcgagcgaaaccccgatcatcatcgcccgccacctg
ggcgaattgccggcccacctgcgcgcctccctgctgctcaacctggggcaggcggtaccg
gaagggtacgaacgtttcgagcgtatcctggaaatcatcggccaggatgccgacgagcgg
ctgccggggcgcgaacgggtaggccactacaagcaggctggttgcacggtgaacttccac
gatctggggcagcagcgggcaaactaa

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