Oryzomicrobium terrae: OTERR_25240
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Entry
OTERR_25240 CDS
T06190
Symbol
dd1
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
otr
Oryzomicrobium terrae
Pathway
otr00470
D-Amino acid metabolism
otr00550
Peptidoglycan biosynthesis
otr01100
Metabolic pathways
otr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
otr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OTERR_25240 (dd1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OTERR_25240 (dd1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OTERR_25240 (dd1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
otr01011
]
OTERR_25240 (dd1)
Enzymes [BR:
otr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
OTERR_25240 (dd1)
Peptidoglycan biosynthesis and degradation proteins [BR:
otr01011
]
Precursor biosynthesis
Amino acid ligase
OTERR_25240 (dd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_3
ATPgrasp_ST
ATP-grasp
ATP-grasp_4
TTL
GARS_A
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
QEL66000
UniProt:
A0A5C1EAR5
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All DBs
Position
complement(2844986..2845906)
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AA seq
306 aa
AA seq
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MNKEFGKVAVLFGGTSAERDVSLNSGSRVLAALQRQGVDAHAFDPAEQPLDALKGYDRAF
IALHGRHGEDGTIQGALELMHIPYTGPGVLASAAGMDKWRTKLLWQAAGLPVPAYRMLTA
ASDFAAVVRELGLPLFVKPACEGSSIGVTKVKTAAELRSAYQEAARHDSLVIAEQAVLGG
EYTVGILGSGDDMRALPIIKIEPATEFYDYEAKYLRDDTTYRCPSGLAAGQEAAIQAQAL
QAFRVLGGRGWGRVDFLMDDAGNPYFLEANTSPGMTDHSLVPMAARVAGLDYEALVLQVL
ALAAND
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaattcggaaaagtagcggtgctgttcggcggcacctcggcagaacgggac
gtctccctcaacagcgggagccgtgtgctggcggcgctgcaacgccagggcgtggatgcc
catgccttcgatccggcggagcagcccctggacgccctcaagggctacgaccgggcgttc
atcgccctgcacggccgccacggcgaggatggcaccatccagggggccctggagctgatg
cacattccctacaccggcccgggcgtgctggcttcggccgcgggcatggacaagtggcgc
accaagctgctctggcaggccgccggcctgccggtgccggcctaccgcatgcttaccgcc
gccagcgacttcgctgcggtggtgcgcgaactgggcctgcccctgttcgtcaagccggct
tgtgagggctcgtcgatcggcgtgaccaaggtcaagaccgccgccgagctgcgcagtgcc
taccaagaagccgcccgccacgactccctggtgatcgccgagcaggcggtgctggggggg
gaatacaccgtaggcatcctgggcagcggcgacgacatgcgcgccctgccgatcatcaag
atcgagccggccaccgagttctacgactacgaggccaagtacctgcgcgacgacaccacc
tatcgctgccccagcggcctggccgccgggcaggaggccgccatccaggcccaggccctg
caggccttccgggtgctgggcgggcggggttggggccgggtggacttcctcatggacgac
gccggcaatccctatttcctcgaggccaacacctcaccgggcatgaccgaccactccctg
gtgccgatggcggcccgagtggccggcctcgactatgaagccctggtgctccaggtcctg
gccctggcggccaacgactga
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