Oncorhynchus tshawytscha (Chinook salmon): 112214607
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Entry
112214607 CDS
T05605
Symbol
si:dkey-185m8.2
Name
(RefSeq) trichohyalin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
112214607
NCBI-ProteinID:
XP_024229258
LinkDB
All DBs
Position
LG09:59383278..59397633
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AA seq
2276 aa
AA seq
DB search
MESQGEGYPPFSVSTGGDESMQGVMQREVNPSTSAPPLPELRLVLLGRKGTGKSSAANTI
LGGIGGFESGRPTEECSKKRADLTRRRVTVVDTPGWEWYYPLNSTPDWVRRETLRSMSLC
SPGPHVILLVIRSCASVTESYRKQIEEHLESLGEGVLDHTMLLFTRGDELGVVPMEQRIL
TGGAAFQQLLRRCGNRYHVLDNRSRGDGTQVRELLRKMVEMVENKGGHFGADPALLRLEA
DGRRRARERRKRQRQMEAQTQRGTIRAVLMTDAGSQGSDWDGKQPFSKGTRRLPELRLVL
LGERETGKSSAGNTILGGGGEGAGFFQTGRVTEECTRCQAEVAMRLVTVVDTPGWEGGVA
GPTPERVKREMVWGSVSLCPPGPHAVLLTLRVDTLVSSTPVREHLELLGEEVWRHAVLLF
THGDQLREGVGIEQHIQSGGRDLKWLVEKCGSRYHVISNVNGRGDAAQVSGLLEKVEKMV
AGNRCEAFSSLVQEVSDLTRQRNEKFNQRLKEVGDKMQRQEMELKRMREREVKSIRWFFD
RKKKVKSPGKSGVEKEEDGGEEEEEKRSDGRKNEMGELEERIRWLTEDKEREIQDLGAEN
YRFIAALDQRSREREEIVIKLEEREREIDELKERVDEQQVKLLDLERVIGEKERDKKERE
EEFRGKHQEWRREAEDLKVRIALEEKEKEEWIGRGKTSQNEMYESKQLYEERLLQYEEEM
QRKLHEKEEEMERKLHEKAEEMEGERLLSETRETERRDEQRKRDEREKKEMSKLKEIIEK
KNKEITDTQQLVTEKEKEIVEVRARSVDNVKENERLKENNEQKESEVVAMQRQHTEDKSR
RDAEAMDKLRGKEVELNNLIQKDGENKRELVRLRQTIKQTKTELENLTAAMEKERMNMIQ
EYEKEIKTKEEEMRLMLEDHESAVSQLQKKEAESRRNISGMTECLRDSQGKVEVLQELNV
KLKKEIDNLRKKCQEYEEDQGVQRTERESREADIRELLCGYEEQLKHKDREIHHVMEERN
LEVAALKQTNDQRQKELENMKEGEEVREKQVEEIRGCYEKNLRERQNELKQTAEEKEQEL
EKRGRVYDEKEREQARSKDVLDNRGRELDTKDAELVKREEVLVKGEEGLVKRGKELVKEE
EGLVKRGKELVKGKEELVKGEEALVKGEEKLVKGEEELVKREEVLVKREEVLVKGEEELV
KREEVLLKREEVLVKREEVLVKREEMLVKGEENLVQGEEELFKREEGLVKGEEELMKREE
ELLKRQEGLVKGEEERVKREEELVKREELLVKGEEKLVKREENLAKGEEELFKREEELVK
GEEELMKREEELVKGKDELFEREEELVKGEEELVKREEELFEREEELVKGEEELLKREEE
LFKREEELVKGEEKLVKRKEELVKGEEGLVKRQEEQVKRKEELVKRQEELGKGEEGLVKR
QEEQVKGEEKLMKREEELFKREEVQVKKEEKLVKRQEQLVKGEEKLVNRDKMLVKGEEEL
EKREGELVKGEEELVKKEEELEKREGELVKREEELVKREEELVKREGELVKRKEELVKRD
EELEGRRREVKNWEEDLETRQKGQEEQKQELWSREKCLKRKEEESESKEQNICSKEQDVE
KIEKELQNRKNQLDSREYDLKTSEENIKKIELDLENLQRQQDSRQLELDERENEQGSGKI
EHQNQREDLEKRERELRAREHDLRCGEQGLENQEEDMNNRQHDMDKRQEELENIQQDLEK
RELHLENREEEIQKHRQALEKREKEIKDSKQGLENREHHLKNGEQELLKWRTELEIQGKH
MSNRSQGMEKLEREVENHQQELRNREEGFEDKMQELRNWEQRLERLETELERREHEQRNT
NNGFEEKEQEVNHFEKDPDGRDYDVEIREPNGLIPSHEAQGGDVCGMTTRCDNVTLEGIE
DSHMMYQEVGVVEKEGRELQGKEPERSGSITDREDQTMMECASSTILNNNSQFERMAAPE
DKEEARQNLEEQTKEEIEEEGDEERNREHPKQEGDLQNTGKECLLLKRGSQDEIWPEECK
KRGRICEEEDEEDNYKEIEDVNVISDLKLTLSPGPSVENTKRIQRSELRLVLLGETWSSR
HPAGYTILGREASHPGESISMPWRGQIAGRQVSVVEPLGLKWRNGPDGNTSVTTDPTQFQ
NIFHSVSLSHPGPHAILLVLPAYLSFTQKYRRAVEHHMSVLGEDIWRRTMVLFTWGEALG
ESAEQHILRNGDLQWLVGQCGGRYHILASRKNNSQTAELMEKIEEMVAGNYQCNGD
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacagggcgaaggttaccctcccttttcggtctcaactggtggtgatgagagt
atgcaaggtgttatgcagagagaggtgaacccctcaactagtgctccccctcttccagaa
cttaggctagtcctgctgggaaggaaaggaacagggaagagctctgcagccaataccatc
ctgggaggaataggggggtttgagagcggcagaccaaccgaggagtgctcgaaaaagcga
gccgatctaaccaggagacgagtcaccgtggtagacacccctggctgggaatggtactac
ccgctcaacagcacccccgactgggtccggagagagacgttgcgcagcatgtccctgtgc
tcccccggacctcacgttatcctgctagtgatacgttcctgcgcctcggtaaccgagtcc
tacaggaagcaaatagaggagcacctggagtccctgggggaaggggtgttggaccatacc
atgttgctgttcaccaggggggacgagctgggtgtggtgcccatggagcagaggatcctg
acgggtggggctgccttccagcagctgctacggaggtgtgggaacaggtaccatgtcctg
gacaataggagccggggagatggaactcaggtaagggagctactgaggaagatggtggag
atggtggagaacaagggaggacattttggggcagatcctgccctcctgaggttggaggca
gacgggaggaggagagcgagggaacggaggaagaggcagagacagatggaggcccagact
cagaggggtaccatccgagctgtgcttatgactgacgctggatcccagggctctgattgg
gatgggaaacaaccattctctaagggtactcgtcgtctcccagagctgagactggtcctc
ctgggagagagagagactgggaagagctcggctgggaacaccatactgggtggaggtgga
gaaggagcagggttcttccagactgggagagtgacggaggagtgcacccggtgccaggca
gaggtagccatgaggctggtgaccgtagtggacacccccggttgggaaggtggagtagca
ggccccaccccagagagggtaaagcgggagatggtgtggggtagcgtgtccctgtgtccc
ccgggaccccacgctgtgctcctcaccctgagggtggacaccctggtcagttccacacct
gtaagagaacacctggagctcctgggggaagaggtctggaggcatgctgtcctcctgttc
acccatggggaccagctgagggagggggtgggcattgagcagcacatccaaagtggaggg
agggaccttaagtggctggtggagaagtgtgggagcaggtaccacgtcatcagtaatgtg
aatgggcgtggggacgccgctcaggtgtctggcctgctggagaaggtagagaagatggtg
gccgggaacaggtgcgaggccttctcgtcgctagtgcaggaggtcagcgacctcaccaga
cagaggaacgagaaattcaaccagcgtctcaaagaggttggtgacaagatgcagcgtcag
gagatggagctcaagaggatgagggagagggaggtcaaaagcatccgctggtttttcgat
cggaagaagaaagttaaatctccggggaagtcaggcgtggaaaaagaggaggatggaggg
gaggaggaggaggagaaaaggagtgatgggaggaagaacgaaatgggcgaactagaggag
aggattcggtggctgacggaggataaggagagagagattcaggatctgggcgcggaaaac
tacagattcatcgctgcgctcgatcagagaagcagggagcgagaggagatagtcatcaag
ctagaggagagagagagagagattgacgagctgaaagagcgagttgacgagcagcaagtg
aaactgctcgaccttgagcgtgtcatcggggagaaagaacgagataaaaaagagagggag
gaagagtttagagggaagcatcaggaatggaggagggaagcagaggatttgaaagtcagg
atagccctggaagaaaaggaaaaagaggaatggataggaagaggaaaaacgtcacagaac
gagatgtatgagtcaaaacagttgtatgaggagagacttttacagtatgaggaagagatg
cagagaaaactgcatgaaaaagaggaagagatggagagaaaactgcatgaaaaagcagaa
gagatggaaggagagagactgctatctgagacaagggaaacagaaaggagggatgagcaa
agaaagagagatgaaagggaaaagaaagagatgagcaagctgaaagaaatcattgaaaag
aaaaataaagaaataactgatacacagcaattggttacagagaaagaaaaagagattgtg
gaagtgagggcgagatccgttgacaacgtgaaagaaaatgagcggctgaaagaaaacaat
gaacagaaggagtctgaggtggtggcaatgcaacggcaacacacagaggacaaaagtagg
agagatgccgaggcaatggataagttacgagggaaagaagtggagctcaacaacttaata
caaaaggacggggaaaataagagagaactcgtccgtttaaggcaaaccattaaacaaaca
aaaacagaactggaaaacttaactgccgcgatggagaaggaaaggatgaacatgatacag
gaatatgaaaaggaaatcaagacgaaggaagaggagatgaggttgatgttagaagaccac
gaaagtgctgtcagccaactgcagaaaaaggaggcagaaagtagaaggaacatttcaggc
atgacagaatgcttaagggacagccaggggaaggttgaggtactgcaggagctgaacgtg
aaattgaagaaagagattgacaacctcaggaagaagtgtcaggagtatgaggaggaccag
ggggttcagaggaccgagagggagagcagggaggctgacatcagagagctgctctgtgga
tatgaagagcagttaaaacacaaagacagggaaatccaccatgttatggaagagcggaac
ctggaggttgctgcgttgaaacagacaaacgaccagagacagaaggagctggagaatatg
aaagaaggggaggaggtgagagagaaacaggtggaggagataagagggtgctatgagaag
aatctgagagaaaggcagaatgagctgaaacagacagctgaggaaaaggagcaagagctt
gagaaaagggggagagtgtatgatgagaaggagcgagaacaagcgagaagtaaagacgtg
ctggataacagagggcgtgaacttgacacaaaagatgcagagctagtgaaaagagaagaa
gtgctagtgaaaggagaggaagggctagtgaaaagagggaaagagctagtgaaagaagag
gaagggctagtgaaaagagggaaagagctagtgaaaggaaaggaagagctagtaaaagga
gaagaagccctagtgaaaggagaggaaaagctagtgaaaggagaggaagagctagtgaaa
agagaggaagtgctagtgaaaagagaggaagtgctagtaaaaggagaggaagagctagtg
aaaagagaggaagtgctactgaaaagagaagaagtgctagttaaaagagaggaagtgcta
gtgaaaagagaggaaatgctagtgaaaggagaggaaaatctagtgcaaggagaggaagag
ctattcaaaagagaagaaggattagtgaaaggagaggaagagctaatgaaaagagaggaa
gagctactgaaaagacaggaagggctagtgaaaggagaggaagaacgagtgaaaagagag
gaagagctagtcaaacgagaggaattgctagtaaaaggagaggaaaagctagtgaagaga
gaggaaaatctagcgaaaggagaggaagagctcttcaaaagagaagaagaattagtgaaa
ggtgaggaagagctaatgaaaagagaggaagagctagtgaaaggaaaggatgagctattc
gaaagagaagaagaattagtgaaaggagaggaagagctagtgaaaagagaggaagagcta
ttcgaaagagaagaagaattagtgaaaggagaggaagagctattgaaaagagaggaagag
ctattcaaaagagaagaagaattagtgaaaggagaggaaaagctagtgaaaagaaaggaa
gagctagtgaaaggagaagaagggctagtgaaaagacaggaagagcaagtgaaaagaaag
gaagagctagtgaaaagacaggaagagctaggaaaaggagaagaagggctagtgaaaaga
caggaagagcaagtgaaaggagaggaaaagctaatgaaaagagaggaagagctattcaaa
agagaggaagtgcaagttaaaaaagaggaaaagctagtgaaaagacaagaacagctagtg
aaaggagaggaaaagctagtgaatagagataaaatgctagtgaaaggagaggaagaactt
gagaaaagagagggagagctagtgaaaggagaggaagagctagtgaaaaaagaggaagaa
cttgagaaaagagagggagagctagtgaaaagagaggaagagctagtgaaaagagaggaa
gagctagtgaaaagagagggagagcttgtgaaaagaaaggaagagctagtgaaaagagac
gaagagttggaaggtagaagacgagaagtaaagaactgggaggaagatcttgaaacaaga
cagaaaggacaagaagaacagaaacaggagttgtggagcagagaaaaatgcttgaaaaga
aaggaagaagagtctgaaagcaaagaacaaaacatctgcagcaaggagcaagatgtggag
aaaatagaaaaagagctgcaaaacagaaagaaccaacttgatagtagggaatatgattta
aagacttcggaagaaaatattaagaaaatagagctggatctagaaaacctgcagcgacaa
caggacagccgtcaactagagctggatgaaagggaaaatgaacaagggagtgggaagata
gaacatcagaaccagagagaggatctggaaaaaagagagagagaactgagggccagagaa
catgatttgagatgtggagaacaagggttggaaaaccaggaagaggatatgaacaaccga
cagcacgacatggacaaaagacaagaagaattggaaaatatacaacaagaccttgagaaa
agggagcttcacctggagaatagagaagaagaaatacagaagcacagacaagctctggaa
aaaagagagaaagagatcaaagacagcaaacaaggacttgaaaacagagaacaccatttg
aagaatggagagcaagagttactgaaatggagaacagagttagaaattcaagggaaacat
atgagcaacaggagccaaggcatggaaaagctggagagagaggtggaaaaccatcaacaa
gagctaaggaacagagaggaaggttttgaagacaaaatgcaagagttgaggaattgggag
cagcgtctagaaagacttgaaacagaactagagaggagagagcatgaacagaggaatacg
aataatggattcgaggaaaaggagcaagaagttaaccattttgaaaaagatccggatggc
agagattatgacgtggagatcagagagcctaacggattgataccaagccatgaagcacaa
ggaggagatgtctgtggcatgacaacaagatgtgataatgtgacactagagggtatagag
gattcccatatgatgtaccaggaagtaggagtggtggagaaagaaggacgggaactgcag
ggaaaagaaccagagaggagtggaagcatcacagaccgggaagatcagacgatgatggaa
tgtgcctcgtctacaatcttaaacaataacagtcagtttgaaagaatggcagcgccagaa
gacaaagaggaggctagacagaatctggaagaacagacgaaagaggagatagaagaagag
ggagatgaggagagaaatagagagcatcccaaacaggaaggggatcttcagaacacaggg
aaggagtgtcttctgttaaaaagagggagccaggatgagatatggccggaagaatgtaaa
aagagggggagaatatgtgaagaggaggatgaggaggataattataaggaaattgaagat
gtaaacgttatctcagacttaaagttaactctaagtccaggccccagtgtggaaaacact
aaacgcatccaaaggtctgagctgaggctggtactgttaggggagacttggtcctcccgt
cacccagcagggtacacaatcctgggcagagaggcctcacacccaggtgagtccatctcg
atgccatggcggggacaaatcgctggaagacaggtcagtgtggtagaaccacttgggcta
aagtggcgtaacggaccagacggcaacacctccgtcaccacagacccaacacagttccag
aacatcttccatagtgtttccctgtcccacccaggtccccacgcgatcctcctggtccta
ccagcctacctgtcattcacacagaagtatcggagagcggtggaacaccatatgagtgtg
ctcggggaagatatttggcgtcgcactatggtgctgttcacgtggggggaagctttaggg
gagagtgcggagcagcacatattgaggaatggggacctccagtggctcgtgggacaatgc
ggcggtagataccatattctggccagcaggaagaacaactctcaaacagcagagctaatg
gagaagatagaggagatggtggcaggaaactatcaatgtaatggagactga
DBGET
integrated database retrieval system
