KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112215764
Entry
112215764         CDS       T05605                                 

Definition
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase-like isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04012  ErbB signaling pathway
otw04068  FoxO signaling pathway
otw04140  Autophagy - animal
otw04150  mTOR signaling pathway
otw04210  Apoptosis
otw04218  Cellular senescence
otw04270  Vascular smooth muscle contraction
otw04370  VEGF signaling pathway
otw04371  Apelin signaling pathway
otw04510  Focal adhesion
otw04540  Gap junction
otw04625  C-type lectin receptor signaling pathway
otw04810  Regulation of actin cytoskeleton
otw04910  Insulin signaling pathway
otw04912  GnRH signaling pathway
otw04914  Progesterone-mediated oocyte maturation
otw04916  Melanogenesis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112215764
   04012 ErbB signaling pathway
    112215764
   04370 VEGF signaling pathway
    112215764
   04371 Apelin signaling pathway
    112215764
   04068 FoxO signaling pathway
    112215764
   04150 mTOR signaling pathway
    112215764
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112215764
  09143 Cell growth and death
   04210 Apoptosis
    112215764
   04218 Cellular senescence
    112215764
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112215764
   04540 Gap junction
    112215764
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112215764
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    112215764
  09152 Endocrine system
   04910 Insulin signaling pathway
    112215764
   04912 GnRH signaling pathway
    112215764
   04914 Progesterone-mediated oocyte maturation
    112215764
   04916 Melanogenesis
    112215764
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    112215764
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112215764
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:otw01001]
    112215764
Enzymes [BR:otw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     112215764
Protein kinases [BR:otw01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   112215764
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like zf-RING-like Pkinase_fungal C1_2 zf-RING_2
Other DBs
NCBI-GeneID: 112215764
NCBI-ProteinID: XP_024230913
LinkDB
Position
16
AA seq 682 aa
MEHLQGAWKTLSNGFGMKDSVFEGPCLSPTLVQGFPYQRRSSDDSKIPDSKTSSTIRVYL
PNQQRTVVNVRPGMTLHSCLIKALKVRGLQPECCAVFRLHPGQRSKKSRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLFPTPGESGGPSLPPLTSRRMRESLSRFPSSSLHRYSTPHAFNYTAPY
PPTGITLSQRQRSTSTPNVHMVSTTLPVDSSMIELDCLNAYPSSWCRRFWLKRRVGIVRF
SNSFLEATSESPAKEAMRNHEAMRNHDSDGSSPSQSPTSWSQSKTPAPDRRERAPSFNTQ
EKHKIRPRDKRDSSYYWEIEASEVVLHSRIGSGSFGTVYKGKWHGDVAVKILKVIDPTPE
QFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETNLQMFQL
IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKARWSGSHQVEQP
SGSILWMAPEVIRMQDNMPYSFQSDVYSYGVVLYELMTGELPYSQIANRDQIIFMVGRGY
LSPDLSKLYKSCPKAMKRLVADCIKKIKDERPLFPQILSSIELLQHSLPKINRSASEPSL
HRASHTEDINVFTSTYSRLPVF
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggagcacctccagggtgcgtggaagaccctgagcaacggctttggaatgaaagactct
gtgttcgagggcccctgcctctcccccaccttggttcagggctttccctaccagcgccgc
tcctcagacgacagcaagatccccgactctaagaccagcagcaccatccgagtctacctc
cccaaccagcagcgcaccgtggtgaacgtgaggccaggtatgaccctgcacagctgcctg
ataaaagcgctgaaggtgcggggtctgcagccggagtgctgtgctgtcttcagactgcac
ccaggacagaggagtaaaaagtcacgtatggattggaataccgactctacctcactaatt
ggggaagaactgctggtggaagtgttagatcatgtccccttgacgacgcacaactttgtt
cggaaaacatttcttaagttggccttctgcgatatatgccagaagttccttttgaacggt
ttccgttgccaaacatgcggctacaaattccatgagcattgcagcaccaaagtgcccacc
atgtgtgtggattggagcaacatcagacagctcctgttgttccctacaccaggtgaaagt
gggggtccatctcttcctcctcttacatctcgacgaatgagagaatcactatcccgattc
cctagcagctctctgcaccgctactcaacccctcacgccttcaactacacggccccctac
ccacccacagggatcactctgtcccagaggcagcgatccacctccacgcccaacgtccac
atggtcagcaccaccctgcctgtcgacagcagcatgattgagctagattgcctgaatgcc
taccctagctcctggtgcaggcgcttctggctgaagaggagagtaggtattgttcgcttc
tccaactcttttcttgaggcgacttcagagagcccagccaaggaggcaatgcgtaatcac
gaagcaatgcgtaatcatgactccgacgggagttcccccagccagagtcccacaagctgg
tcacagtctaaaaccccagcgccagacagacgagaacgggctccgtcgttcaacactcaa
gagaaacacaaaattcgtccgagggacaagcgagactctagttactactgggagatcgag
gccagtgaagtggtgctgcactcccgtatcggctcaggctcctttggaacggtgtacaaa
gggaaatggcacggtgacgtagcagtgaagatcctaaaggtgattgaccccacaccggaa
cagttccaggcctttagaaacgaggtggctgtgctaaggaaaacacgacacgtcaacatc
ctattgttcatgggctacatgacgaaggacaacctggccatcgtgacacagtggtgtgaa
ggcagcagcctctataaacacctccacgtccaggagactaacttacagatgttccagctc
atagacatcgccaggcagacagctcagggcatggactatttgcacgctaaaaacatcatc
caccgggacatgaaatcaaacaatatcttcctacacgagggcctgacggtgaagattggc
gactttggtctggccacagtcaaagccaggtggagtggttctcaccaggtggagcaacct
tcagggtccatactgtggatggctccagaggttatacggatgcaggacaatatgccctat
agtttccagtctgacgtatactcttacggtgttgtcctctatgagctgatgacaggagag
ctgccatactcacagatagccaacagagaccagatcatcttcatggtgggtcgggggtac
ctgtctccagacctcagtaagctttataagagctgccccaaagccatgaagaggctggtg
gctgactgcatcaagaaaatcaaagacgagaggcctctgtttccccagatcctatcgtcc
attgagctgctccagcactccctgcctaagatcaaccgcagtgcctcggaaccctccctg
cacagagcctcccacaccgaggacatcaacgtcttcacatcaacctatagcaggctgcct
gtgttctag

KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112222214
Entry
112222214         CDS       T05605                                 

Definition
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase-like
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04012  ErbB signaling pathway
otw04068  FoxO signaling pathway
otw04140  Autophagy - animal
otw04150  mTOR signaling pathway
otw04210  Apoptosis
otw04218  Cellular senescence
otw04270  Vascular smooth muscle contraction
otw04370  VEGF signaling pathway
otw04371  Apelin signaling pathway
otw04510  Focal adhesion
otw04540  Gap junction
otw04625  C-type lectin receptor signaling pathway
otw04810  Regulation of actin cytoskeleton
otw04910  Insulin signaling pathway
otw04912  GnRH signaling pathway
otw04914  Progesterone-mediated oocyte maturation
otw04916  Melanogenesis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112222214
   04012 ErbB signaling pathway
    112222214
   04370 VEGF signaling pathway
    112222214
   04371 Apelin signaling pathway
    112222214
   04068 FoxO signaling pathway
    112222214
   04150 mTOR signaling pathway
    112222214
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112222214
  09143 Cell growth and death
   04210 Apoptosis
    112222214
   04218 Cellular senescence
    112222214
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112222214
   04540 Gap junction
    112222214
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112222214
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    112222214
  09152 Endocrine system
   04910 Insulin signaling pathway
    112222214
   04912 GnRH signaling pathway
    112222214
   04914 Progesterone-mediated oocyte maturation
    112222214
   04916 Melanogenesis
    112222214
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    112222214
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112222214
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:otw01001]
    112222214
Enzymes [BR:otw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     112222214
Protein kinases [BR:otw01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   112222214
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like zf-RING-like Pkinase_fungal C1_2 zf-RING_2
Other DBs
NCBI-GeneID: 112222214
NCBI-ProteinID: XP_024240680
LinkDB
Position
22
AA seq 644 aa
MEHLQGAWKTLSNGFGMKDSVFEGPCLSPTMVQGFPSQRRSSDDSKIPDSKTSSTIRVYL
PNQQRTVVNVRPGMTLHSCLIKALKVRGLQPECCAVFRLHPGQRSKKSRMDWNTDSTSLI
GEELLVKVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLFPTPGESGGPSLPPLTSRRMRESLSRLPSSSLHRCSTPHAFNYTAPY
PPTGGALSQRQRSTSTPNVHMVSTTMPVDSSMMEEAMRNHEAMRNHDSGGSSPSQSPTGW
SQSQSNTPAPDRRERAPSFNTQEKHKIRPRDKRDSSYYWEIEASEVVLHSCIGSGSFGTV
YKGKWHGDVAVKILKVIDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW
CEGSSLYKHLHVQETNFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVK
IGDFGLATVKARWSGSHQVEQPSGSILWMAPEVIRMQDNMPYSFQSDVYSYGVVLHELMT
GELPYSQIANRDQIIFMVGRGYLSPDLSKLYKSCPKAMKRLVADCIKKIKDERPLFPQIL
SSIELLQHSLPKINRSASEPSMHRASHTEDINAFTSTYSRLPVF
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggagcacctccagggagcatggaagaccctgagcaacggctttgggatgaaggactct
gtgttcgagggcccttgcctttccccgaccatggtgcagggcttcccctcccagcgccgc
tcttccgacgacagtaagatccccgactccaagaccagcagcaccatccgcgtctacctc
cccaaccagcagcgcacagtggtgaatgtgaggccaggtatgaccctgcacagctgcctg
atcaaagcgctgaaggtgcggggcctgcaaccggagtgctgtgctgtcttcagactgcac
ccaggacagaggagtaaaaagtcacgtatggattggaataccgactctacctcactaatt
ggggaagaactgctggtgaaagtcttagatcatgtccccttgacgacgcacaactttgtt
cggaaaacatttctgaagttggccttctgcgatatatgccagaagttccttttgaatggt
ttccgttgccaaacatgcggctacaaattccatgagcattgcagcaccaaagtgcccacg
atgtgtgtggattggagcaacatcagacagctcctgttgttcccgacaccaggtgaaagt
gggggtccatctcttcctcctcttacttctcggcgaatgagagaatcgctgtcccgactc
cccagcagctctcttcatcgctgctctacccctcacgccttcaactacacggccccctac
ccacccacggggggcgctctgtcccagaggcagcgctccacctccacgcccaacgtccac
atggtcagcaccaccatgcccgtcgacagcagcatgatggaggaagcaatgcgtaatcat
gaagcaatgcgtaatcatgactcaggcgggagttcccccagccagagtcccacaggctgg
tcccagtcccagtctaacaccccagctccagacagacgagagagggctccttcattcaac
actcaggagaaacacaaaatacgtccgagggacaagcgggactccagttattactgggag
attgaggccagtgaagtggttcttcactcctgtatcggctcaggctccttcggaacggta
tacaaagggaaatggcacggtgacgtagcggtgaagatcctaaaggtgattgaccccacg
ccagagcagttccaggccttcagaaacgaggtggctgtccttaggaaaacgcggcacgtc
aacatcctgttgttcatgggctacatgacgaaggacaacctggccatcgtgacccagtgg
tgtgagggcagcagcctctacaaacaccttcacgtccaggagaccaacttccagatgttc
cagcttatagacattgccaggcagacagctcagggcatggactatttgcacgccaaaaac
atcatccaccgggacatgaagtcaaacaatatcttcctacatgagggcctgacggtgaag
ataggagactttggtctggccacggtcaaggccaggtggagtggttctcaccaggtggag
caaccctcagggtccatactgtggatggctcctgaggttatccgtatgcaggacaacatg
ccctatagtttccagtctgacgtgtactcctacggtgttgtcctccatgagctgatgacg
ggagagctgccatactcacagatagccaacagagaccagatcatcttcatggtgggccgg
gggtacctgtctccagatctcagtaagctttataagagctgtcctaaggccatgaagagg
ctggtggccgactgcatcaagaaaatcaaggacgagaggccactgttcccccagatcctg
tcgtcaattgagctgctccagcactccctgcctaagatcaaccgcagtgcctcagaaccc
tccatgcacagagcctcccacaccgaggatattaacgccttcacttccacctatagcaga
ctgcctgtgttctga

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