Oncorhynchus tshawytscha (Chinook salmon): 112216205
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Entry
112216205 CDS
T05605
Name
(RefSeq) opsin-5-like
KO
K08385
G0-opsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112216205
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Vision
Opsin
112216205
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
112216205
NCBI-ProteinID:
XP_024231799
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Position
LG16:complement(68570809..68595688)
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AA seq
399 aa
AA seq
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MGNASDTALFVSTISKELDFLMGTLYSIFCVLSLLGNGILMLVAYRKRLSLKPAEFFIIN
LSISDLGMTLSLFPLAIPSAFAHKWLFDEITCQFYAMCGVLFGLCSLTNLTALSSICCLK
VSFPNYGNKFSSSHACVLVVAVWCYASVFAISPLTQWGHYGPEPYGTACCIDWHAPNHQL
SALSYIVCLFLFCYALPCTIIFLSYTFILLTVRGSRRAVQQHVSSQTKTTNAHSLIVKLS
VAVCIGFLGAWSPYAIVAMWAAFGDATIVPPAAFALAATFAKSSTIYNPMVYLLCKPNFR
KCLCRDTSTFRNRICRGSPRPEQKDPFGSISQPSQRNNKEMSISYGQPESPVACLHCAEN
GAPCQTGTTSQRSACILTGSTYGEVTVSQLSANLQADFL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcttcagacacagccctgtttgtctccacaatctcaaaggagcttgacttc
ctcatgggcacactctacagcatattctgtgttctgtctctcctggggaatggcatcttg
atgcttgttgcgtatcgtaagcgcttgtccttgaagccggccgagttcttcatcattaac
ctgtccatcagcgaccttgggatgaccctgtctttattccctctggccattccctctgca
ttcgctcacaagtggttgtttgatgagatcacctgtcagttctatgctatgtgtggagtt
ctgtttggtctgtgcagcctgaccaacctcacagctctctcctccatctgttgcctcaaa
gtcagcttccctaactatggtaacaagttctcctcgtcccatgcctgcgtcctggtggtg
gctgtgtggtgttacgcctctgtgttcgccatcagtcccctgacacagtggggacactac
gggccggagccttatggcactgcctgttgcattgactggcacgcgcccaaccaccagctg
tcagccctgtcctacatcgtctgcctgttccttttctgctacgctctgccctgcaccatc
attttcctctcctacaccttcatcctgctgacggtgcgcggctctcgccgggccgttcag
cagcatgtgtcatcccaaaccaaaaccaccaatgcacacagcctcattgtcaagttgtcg
gtagcagtatgcatcggcttccttggtgcatggagcccttacgccatagtggccatgtgg
gcggcatttggtgatgccaccatcgtgcctcctgctgcattcgccttggcggccaccttt
gccaagtcgtccaccatctataaccctatggtctacctgctgtgcaaacccaacttccgc
aagtgtctttgccgagacacgtccacattccgcaataggatctgcaggggcagcccccgg
cctgaacagaaagacccctttggatccatatcacaaccatcccagagaaacaacaaggaa
atgagcatctcatacggacagccagagagccccgtggcgtgtctgcactgtgctgagaat
ggagctccttgccaaacaggaaccacgtcccagaggagtgcctgcatactgaccggctcc
acctacggcgaggtgactgtcagtcaactctctgccaatctgcaggctgatttcctctag
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