Oncorhynchus tshawytscha (Chinook salmon): 112219446
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Entry
112219446 CDS
T05605
Symbol
setd1ba
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112219446 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112219446 (setd1ba)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112219446 (setd1ba)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112219446 (setd1ba)
HMT complexes
COMPASS/SET1 complex
112219446 (setd1ba)
COMPASS/SET1 complex (yeast)
112219446 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
112219446
NCBI-ProteinID:
XP_024236458
LinkDB
All DBs
Position
LG20:complement(13375043..13398703)
Genome browser
AA seq
1876 aa
AA seq
DB search
MSKPGERNRLNEDHGRKQSSSLANGMDNHHPVCSSGEKRSHHWRSFKLIIDPALKKGSHK
LYRYDGTSFNMPNPGMPPVDIVRDPRIGRLWTKYKETDLPVPKFKIDECYIGRVPPKEVT
FARLNDNIREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVIFGTVKAAKDAVQTLHN
TSVMGNIIHVELDPKGENRLRYFQLLLNGTFTPRTLPVGGEVSPRSLAEALLACEPLRRL
SESSSSAAVGGTVTPSGTGTNTTPLSQDTAYSSLRQDTPQSQGTPHTPRQTSTPFSQDSS
YSSRQGTPAYQSSRAEGSGSYKSRRHESKFQDAYNRRPERRYVHGAGGSGSSSSSSSYRG
NFEQSAFKQHQPAPPEPPPSASSFAHTPPPPTSASFKSAFSPYQQPPCPRRSPSEPPIHQ
PVQREAEYRRPPXPPMAPATDFMPVKDKPGTPPIPEPPPEPKAHPSTPLARKPEPCPPSP
GTPTLESERNSLDSRIEMLLKEKRTKLPFLPGGDSSDTEVRMEGSPISSSSSQLSPIPPY
GGTHTSRPSSTGLEDVSPTPLPDSDDEEPIPGTGLLLERVISPDHLHGMNTSDPKDGRLG
NHTPTDKLESHQSSGEDMEISDEDDMPGTPTHSGDCAKGIVVHSAVSPMQSMPLPPPGFH
PLPPQAGFGLPHHLSAVPGPHLAPGVPHPMLPHLYPHGMVPMMQMELMSCLPQWGSVHMS
FQMQTQMLSRMAQTRGPYPYPHFMNTGGTASAGSAAMQFGGPYLPLSMSSTPAASAGGHG
QQPWPHPSMPKFNPAVPPPGYEAKKEDPHKATVEGVLLVIVKELKAIMKRDLNRKMVEVV
AFRAFDEWWDKKEHSAKASLTPVKAGEEEKEKPKPKETMGSSLLENWNKGEGLGYEGMGL
GIGLRGAIRLPSFKVKRKDPPDATSTGDTKRARPSTPVDDELEDIAELPEDGSRMDEDSA
ALRRRHARPLELDSEGEEEEETSGKEESLSDREEEPDETEASERLSSGKESGEDEEEDEV
ASTSDGESSESSDEDVASSASSKVVSDSSASGDSSDYDSSSEEEAEEEEEEEEEEEAAVD
VESLPDKDEDRVRTSSSSSSSSSSSSEEEVEPKAPSTPLGPPPEDEPSELAGLEEDQRPR
EGLKLKPNHRSLSEVTGAAEPGQTSLEDLRPPSPKGVPAEESDLDLEVAIPVLKTEPQDD
VTNLRPPTPTGTLADSDQDSRPKAHTEDKDLPCTPGRGASTSLDPDAVLLRSLVVPPMHL
PPSPAMGGHSLLLPPPGPMPDLPLPFRARLSTDEDVPRTPGRDLMDRARGLGKSQNSTEN
VPVTPGSDAPLTGSSLVSLSSPHISGSPFSYPAQSPVLSAGIPRTPGRDLTFTPVFPDPT
ALAAGLPIHRKASSESPLFKEPPLSTLASQTFPPDSLQGQALTSVPKDLPAVPALDLPVP
PDITPPKRKPGRPKSKKAAALAALAALTSPKTEPMELSATPTSMPPSLPHDAQLRELSAD
MAAADTLPGIPGYVGLDSSTVGLDFREGEPEPHTVLPLDDRFLPYEEEERVQKPARKVRR
GWEELLLASHSPAFTPPRPHLAPRSEFEEMTILYDIWNDGIDEEDIRHLQVTYDKMLQQD
NGNDWLNDTLWVQHPPTNIPAVKKKRRDDGMRDHMTGCARSEGYYKIDKKDKIKYLNSNK
HLLEEGPIDMQGKSIPAQPLVSTRAGSERRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIR
FCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDT
IIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDE
KIPCLCGAENCRGTLN
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggaaagaaacaggctaaacgaagaccatggcagaaagcagagttca
agtttggcgaacggcatggacaaccaccatcccgtttgcagttcgggagagaaacgaagt
caccattggagaagtttcaagttgattattgacccagcgttgaaaaagggatcgcacaaa
ctgtatcgttacgatggaacttcatttaacatgcccaaccctgggatgccacccgtcgat
atcgtccgagacccaagaatcggtcgtctctggacaaagtacaaggagaccgatctgccg
gttccaaagtttaagattgacgaatgttacatcggccgtgttccacccaaggaggtgaca
tttgccaggctgaatgataacatcagggaaggttttttgactgacatgtgcaagaaattt
ggagacatagaagaggtggaaattctctacaatccgaagaacaaaaagcatttaggaata
gctaaagttatttttggaactgtaaaagcagccaaggatgctgtccagactctacacaac
acgtctgtcatgggcaacatcatccacgtggagctggatcctaaaggagagaatcgcctt
cgatacttccagctacttctgaatggcaccttcacccctcggacacttccggtgggagga
gaagtgtcccctcgtagcctggcagaggctcttctggcctgtgaacccttgcgccggctc
tctgagagcagctcatctgctgcagtgggaggcacagtgacccccagcggcaccggcacc
aacaccaccccactgtcccaggacacggcttactctagcctaaggcaagacacgccgcag
tcccagggcacccctcatacccctcgccagaccagcacccccttctctcaggactccagc
tattccagcagacagggcaccccagcctaccagtctagccgggccgaaggctccggaagc
tacaagtctcgcagacacgagagcaagttccaggatgcctacaaccggagaccggagagg
cgctacgtccatggcgctgggggatcgggatcctcttcatcctcctcctcttacagagga
aattttgaacagtctgcctttaagcagcaccaacctgccccacctgaaccccctccctct
gcctcatcctttgcccacacaccacctccccctaccagtgccagctttaagtcagccttc
tccccctaccagcagcccccatgcccccggcgttccccctcagaacctccgatccaccag
cccgtccagcgggaggcggagtaccggagacccccanngcctcccatggcccctgccact
gacttcatgccagtcaaggataagccaggtactccacccattccagaacccccacctgaa
cccaaggcccaccccagcaccccccttgcccggaaaccagagccctgcccaccttctccc
ggcaccccgacgctggagtcagagcgaaatagcctggactcccgtatcgagatgctgctc
aaggagaaaaggacaaagcttcccttccttcctggaggcgactcatcagacactgaggtg
cgtatggaggggagccccatctcctcctcttcctctcagctgtcacccatccctccttat
gggggcacccacacctctcggccctctagcacaggcctggaggatgtcagcccaacgccc
ctgcctgactccgatgatgaggagcccatccctggaacaggcttgctcctcgagagggtc
atctccccagaccatctccatgggatgaacaccagtgacccgaaggatggtcgcctcgga
aaccacacacccacagacaaattggagagccatcagtcttctggggaagacatggagatc
tcggatgaggacgacatgccaggcacgcccacgcacagtggcgactgtgccaaaggcatc
gtggtccactctgctgtgtcccccatgcagtctatgcccctcccaccccccggcttccat
cctctacctcctcaagcaggcttcggtcttccacaccacctctctgccgtcccgggccct
cacctggcacctggagtgccccaccccatgctgcctcacctctacccccatggcatggtg
cccatgatgcagatggagctgatgagctgcctgcctcaatggggcagtgttcacatgtcc
ttccagatgcagacccaaatgctgagtcgcatggcccagacccgggggccctacccctac
ccacacttcatgaacacaggagggacggcttcagctgggtcagcagccatgcagtttggg
ggtccctacctacccttgtccatgagtagcacccctgctgccagtgcagggggccacggg
cagcaaccttggccccatcctagcatgcccaagttcaaccctgctgttcctccaccgggc
tacgaggctaagaaggaggatcctcacaaggccactgtggaaggggtgctgctggtcatc
gtcaaggagctgaaggccatcatgaagagggacctcaaccgtaagatggtggaggtggtg
gcctttagggcctttgacgagtggtgggataagaaagaacactcagccaaggcgtccctg
accccggtgaaggctggcgaggaggagaaggagaagcccaagcccaaagagaccatgggc
tccagtctactggagaactggaacaagggagaaggcctaggctatgagggtatgggcctg
ggcatcggcctccgaggagccatccgcctgccctccttcaaggtgaagaggaaggaccct
cctgatgccacctccaccggggacactaagcgagcgcgaccgtccacgcctgtggacgat
gagctggaggacatagcggaacttccagaagacgggtccaggatggacgaggacagtgcg
gcattacggaggcgacatgcgcggccgctggagctggacagtgagggcgaggaggaagaa
gagacttctgggaaagaggagtctctgtccgatagggaggaggagcctgacgagacagag
gcttctgagaggttgtcatcgggcaaggagagtggagaggatgaggaagaagatgaggtg
gcctcaaccagtgatggtgaatcatcggagtcgtcggatgaggacgttgccagttcagca
tcctcgaaagttgtctctgactcctctgcgagtggggactcctctgactatgattccagt
tcagaggaggaggcagaagaagaggaggaggaagaggaggaggaggaggcggcggtagac
gtggagagtctaccagataaagacgaggaccgggttcggacatcttcgtcctcatcctcc
tcttcgtcttcctcatctgaggaggaggtggagcccaaggcgcccagcacgcccttaggt
cctcccccagaggatgagccctccgagctggctggtttagaggaagaccagaggcctagg
gaggggctgaagctcaagcccaaccacagatccctcagcgaggtcacaggagcagcggag
cctggccagaccagcctggaggacctcaggcccccttcacccaaaggagtcccagctgag
gagtcagaccttgacctggaagtcgccatccctgtattgaagacagagccccaggatgat
gttactaacctgcggcctcccaccccgacgggcaccctggctgacagcgaccaggactct
cgacccaaggcccacacagaggacaaggatctgccctgtacgccaggtagaggggcttcc
acatccctggaccccgacgcagtcctccttagatccctagtagtcccacctatgcacctc
cccccttccccagccatgggaggccactccctcctgctaccgcctcccggccccatgccg
gacctccccctcccctttagggccaggctgtccacagacgaggatgtgccccgcacccct
ggcagggacctgatggaccgggcaaggggcctgggcaagtcccagaacagcactgagaac
gtgcctgtcacacctggcagcgatgcccctctgactggcagcagcctggtcagcctcagc
tccccccacatatccggcagccccttctcctaccctgcccagtcccccgtcctgagtgca
ggtatcccccgaacccccggcagagatttgacctttacccctgtcttcccagaccccaca
gccctggctgctggccttcccatccaccggaaagcctcttcagaaagtccgctgttcaag
gagcctccactcagcaccctggccagccagaccttcccccccgactccctccagggacag
gccttaaccagcgtgccaaaagacctgcctgctgtcccggccttagacctcccagtgccc
ccggacataaccccgcctaagaggaagcctgggcgacccaagagtaaaaaggctgcagct
ctggcagctctggcagcactgacttctcctaagactgagcctatggagctctcggcgact
cccacctccatgcccccctctttgcctcacgatgcccagctccgagaactctctgcagac
atggctgctgcagacactcttcctggaatccccggctacgttgggctagactcctccaca
gtgggcctggacttccgggaaggggagccagagccgcatacggttctgccccttgacgac
cggttcctcccctatgaagaagaggagcgcgtgcagaagcctgcccgtaaggtgcggcga
gggtgggaagagctgctgctggctagccactcccccgcgttcacgccgccgcggccccac
ctcgctccacgctctgagtttgaggagatgaccatcctgtacgacatctggaacgacggc
atcgatgaggaggacatccggcacctgcaggtcacctacgacaagatgctgcagcaggac
aatggcaacgactggctcaacgacacactgtgggtccagcaccctcctaccaacatccca
gcggtgaagaagaagaggagggacgatggcatgagggatcacatgactggctgtgcccgt
agcgagggctactacaagatcgacaagaaggacaagatcaaatacctcaacagcaacaag
cacctgctggaggaggggcccatagacatgcagggcaagagcattcccgcgcagcccctc
gtctccaccagagctggctctgagcgtcggtctgaacagcgccgcctgctgtcctctttc
agctgtgacagcgacctgctcaagttcaaccagctgaagttccgtaagaagaagattcgg
ttctgtaagtcgcatattcacgactggggtttgtttgctatggagccaattgctgctgac
gagatggtgattgagtacgtgggtcagaacatcaggcaggtgattgctgacatgagggag
aagcgctacgaggacgagggcatcgggagcagctacatgttccgtgtggaccacgacacc
atcatagacgccaccaagtgtggcaacttcgcccgcttcatcaaccacagctgcaatccc
aactgctacgccaaggtgatcacagtggagtcccaaaagaagatcgtcatctactcccga
caacccatcaacgtcaacgaggagatcacctacgactacaagttccccatcgaagacgag
aagatcccctgcttgtgtggggcagagaactgtaggggaacgttgaactaa
DBGET
integrated database retrieval system