Oncorhynchus tshawytscha (Chinook salmon): 112220369
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Entry
112220369 CDS
T05605
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112220369 (pus1)
Enzymes [BR:
otw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112220369 (pus1)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112220369 (pus1)
Prokaryotic type
112220369 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
112220369
NCBI-ProteinID:
XP_024237989
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All DBs
Position
LG20:complement(24597632..24601346)
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AA seq
392 aa
AA seq
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MMSEEGSGNMLIKPLKRVEEGNGESGENGHIRKKLKSVEPTGNERKHPKRKVVLLLAYSG
KGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQ
VVSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKD
YYTNNSAAFRLEPETLQRVNQLFGSYKGTHNFHNFTSQKAARDPSARRYITEMSCGEPFV
RGGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGL
VLEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECKEGSMASWMAT
LPIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagggtcaggaaatatgctgatcaagccactgaaacgagtggaggaa
ggaaatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaacca
actggcaatgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggc
aaaggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggat
gagctggtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatg
aaaaaaatgtcattccaaagatgtgcgagaacagacaagggtgtttctgcagctggtcaa
gtggtctctctaaaactgtggatgattgaagacgtaatggaaaagatcaactccaatctt
ccaccacagatcagagtgctgggtctgaaacgagtgacggggggctttaattctaaaaac
agctgtgatgcccgcacatactcctacatgctccccactgtggccttctccccaaaggac
tattacaccaacaattctgctgcattccgccttgagccagagacactgcagagagtaaac
cagctgtttggcagctacaagggcacccataactttcacaacttcacctcccagaaggcc
gcgcgggaccccagcgcccgccgctacatcacagagatgtcctgtggcgagccctttgtg
cgtggaggcgccgagttcgcagagattactgtgcgtggccagagcttcatgatgcatcag
atccggaagatgatcggcctggtgatagctgtggtgaagggctattcgggggacgaagtg
ttaaagcgaagctggggtgaggagaaagtggacgtgcccaaagcccctggcctgggcctg
gtgctggagaaggtgcactttgacaggtacaacaagcggtttggtggggacggcctccat
gagtgcctggagtggactgaagaggagcaggccatcttggctttcaaggaggagcacatc
taccccagcattgtggagacagagtgcaaggaagggtccatggctagctggatggccaca
ctgcccatacatgactttgaggcaactgcaacaggagcgcaggataaggatagggagcag
gatgatgaggagggtaatagatcagattctgcactttga
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