Oncorhynchus tshawytscha (Chinook salmon): 112223208 Help Entry 112223208         CDS       T05605                                  Definition (RefSeq) calpain-2 catalytic subunit-like   KO K03853   calpain-2 [EC:3.4.22.53] Organism otw  Oncorhynchus tshawytscha (Chinook salmon) Pathway otw04141   Protein processing in endoplasmic reticulum otw04210   Apoptosis otw04217   Necroptosis otw04218   Cellular senescence otw04510   Focal adhesion Brite KEGG Orthology (KO) [BR:otw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     112223208  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     112223208    04217 Necroptosis     112223208    04218 Cellular senescence     112223208   09144 Cellular community - eukaryotes    04510 Focal adhesion     112223208  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:otw01002]     112223208 Enzymes [BR:otw01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.53  calpain-2      112223208 Peptidases and inhibitors [BR:otw01002]  Cysteine peptidases   Family C2: calpain family    112223208 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_7 Motif Other DBs NCBI-GeneID:  112223208 NCBI-ProteinID:  XP_024242010 LinkDB All DBs Position 24 AA seq 686 aa AA seqDB search MTSMAGRLARQQERENGVGTNQQAVKYLQQDYETLLQGCLESGKLFQDPSFPAESKSLGY KELGKYSSKTKGLMWKRPTELCSNPKFIDDGATRTDICQGDLGDCWLLAAIASLTLDERV LARVVPPEQSFTDRYAGIFHFQFWQFGEWVDVVIDDRLPTRDGKLLFVHSAEGSEFWSAL LEKAYAKVNGCYESLSGGSTIEGFEDFTGGIAEIYQLDKAPPHLFKIMEKALGLGSLLGC SIDITNSYETEAVTALKLVKGHAYSVTGAEEVHLHGDPVQLIRIRNPWGQVEWTGPWSDG WMSYSDFIRQFSKLEICNLTPDTLASDEVGHWNNYQYKGMWRVGSTAGGCRNHPATFCSN PQFLVCLEDVDDDPLDGVDGCTFLVGLMQKDGRRNRQMGEDLSAVGFAIYAVPDEYKGQS NIHLGPDVLLRQKHVAMSSTFINTREVCDRFCLPPGEYVIIPSTFQPHKNGSFILRVFSE KHAATSEMGSVPAEEVKEIKVAEKDVDPNFKHMFKQIAGSDGEVTVFQLVEILNKVFAKR ADIKTEGFSLETGRHIVSLLDKDGNSKLGLVEFHMLWMKIQKYLEIFKSYDSDRSGTMSS HEMRGARQKSGFHINSAVLQVIVNRYASAHYAIDFHCFVDCLIRVEMLFKMFKTLDTNAS GKIELDVSQWLCLANQLDFPKPGGIN NT seq 2061 nt NT seq  +upstreamnt  +downstreamnt atgacgtctatggcaggtcggctggcccgtcagcaggagagggaaaacggtgttggaacc aaccagcaggcggtaaagtacctccaacaggactatgaaacgctgcttcagggctgtctg gagtccgggaagctgttccaggacccctccttcccagcagagagcaagtctctagggtac aaagagctggggaagtactcatccaagaccaaggggctgatgtggaagagacccacggag ttgtgctcaaaccccaaattcattgacgatggagccaccaggactgatatctgccaagga gatctgggggactgttggctgctggctgctattgcatcactgaccctggacgagagagtg ctggccagggtcgttcctcctgaacagagcttcactgaccgctacgctggcatctttcac ttccagttctggcagtttggtgagtgggtggacgtggtgattgacgaccggctgcccacc agagatggaaagctgctgtttgttcactcagccgagggctctgagttctggagcgccctg ctggagaaggcctacgccaaggtgaatggatgctatgagtctctgtcaggtggctccacc atcgaggggtttgaggacttcacaggagggatagcagagatataccagttggacaaagct cctcctcacctcttcaagatcatggagaaggctctgggcctgggctctctactgggctgt tccattgatatcaccaattcctatgagacagaggcagtgacagctcttaaactggtgaag ggacacgcatactctgtcaccggtgctgaagaggtccatctccatggagacccggtccag ctgattcgcatcaggaacccctggggacaggtggagtggactgggccctggagtgatggg tggatgtcctattcagactttatacgtcagttctccaagctggagatctgtaacctgact ccggacaccctggccagtgacgaggtgggccactggaacaactaccagtataaaggcatg tggcgggtagggtctaccgctggaggctgcaggaaccatccagccacgttctgctccaac ccccagttcctggtgtgtctggaggatgtggacgatgatccactggatggtgtggatggc tgcactttcctggtgggcctgatgcagaaagacggacggcgcaaccgccagatgggagaa gacctcagtgccgtcgggttcgctatctatgcggttcctgatgagtataagggtcaatct aacatccacctgggaccagatgtgctgttgagacagaaacacgtggccatgagcagcacc ttcattaacaccagagaggtgtgtgaccgtttctgccttccccctggggagtatgtcatc atcccctccaccttccagcctcacaagaacggcagcttcatcctcagagtgttctcggag aaacacgcagccaccagtgaaatgggatcggtgcctgctgaagaggtaaaggagattaaa gtggcagagaaagatgtggatcccaatttcaagcatatgttcaagcagatcgccggcagt gacggagaagtgactgtcttccaacttgttgaaattctgaacaaagttttcgctaaaagg gccgacatcaagacggaaggttttagtcttgaaactggacgacacattgtcagtcttcta gataaagatggaaattccaagttgggactggttgaattccacatgctttggatgaagatc cagaaatacttggaaattttcaagagttatgactcagaccgctctggaactatgagttca catgagatgagaggtgctcgacagaagtcaggcttccacatcaacagtgcagtgctgcag gtcatagtgaatcgttatgccagcgcccactatgccatcgactttcactgtttcgtggac tgtctcatcagagttgaaatgctcttcaagatgtttaaaactctggataccaacgcctct gggaagattgagttggatgtgtcccaatggctgtgcctggcaaatcaactagacttccca aagccaggaggaatcaactag

Oncorhynchus tshawytscha (Chinook salmon): 112266430 Help Entry 112266430         CDS       T05605                                  Definition (RefSeq) calpain-2 catalytic subunit-like   KO K03853   calpain-2 [EC:3.4.22.53] Organism otw  Oncorhynchus tshawytscha (Chinook salmon) Pathway otw04141   Protein processing in endoplasmic reticulum otw04210   Apoptosis otw04217   Necroptosis otw04218   Cellular senescence otw04510   Focal adhesion Brite KEGG Orthology (KO) [BR:otw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     112266430  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     112266430    04217 Necroptosis     112266430    04218 Cellular senescence     112266430   09144 Cellular community - eukaryotes    04510 Focal adhesion     112266430  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:otw01002]     112266430 Enzymes [BR:otw01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.53  calpain-2      112266430 Peptidases and inhibitors [BR:otw01002]  Cysteine peptidases   Family C2: calpain family    112266430 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_7 EF-hand_8 Motif Other DBs NCBI-GeneID:  112266430 NCBI-ProteinID:  XP_024299662 LinkDB All DBs Position 2 AA seq 700 aa AA seqDB search MSSIANHLARRKAREEGEGSNDKAIPFNKQDFQTLRRECLESGKLFSDTSFPADWNSLGY NELGRYSSKTRGVEWKRPKELCSNPQFIVEGATRTDICQGALGDCWLLAALASLTLDKDI LARVVPPGQSFEENYAGIFHFQFWQYGQWVDVVIDDRLPTREGKLLFVHSAEGSEYWSAL LEKAYAKVNSSYEALSGGSTTEGFEDFTGGIAETYNLGKAPQCLFKIMKKALGLGSLLGC SIDITSAYETEAVTGQKLVKGHAYSITAAEEVHLHGTPVELVRIRNPWGQVEWTGAWSDD SREWDGVRPEEKSKLDHSAEDGEFWMAYSDFLRQYSKLEICNLTPDTLVSDEVGRWNHYQ FEGMWRVGSTAGGCRNHAATFCSNPQFAIKLDDVDDDPHDGKDGCTFLVGLMQKDGRKER RFSRDLNTIGFSIYQVPDEYKGRTNIHLGPDVLLRQKSVAMSNTFINLREICDRFKLPPG EYVIIPSTFEPHKKGSFLLRVFAEKHAATSPMEEDISVEVDEPDITEGDVDPYFKRLFLQ IAGSDSEVSAFELQKILNRVVTQRSHVKTDGFSLETCRHIISLLDMDGNAKLGLVEFHTV WTKIQKYLEIFKSHDSDNSGTMSTHEMREALTEAGFQLNSEVLQLIVSRYANSEYSMDFD CFMGCLIRLEMLFKMFKTLDKHDSGKIELDALQWVCLGLN NT seq 2103 nt NT seq  +upstreamnt  +downstreamnt atgtccagtatagctaaccacttggccaggaggaaagctagggaggaaggtgaaggtagc aacgacaaggccatcccctttaacaagcaagacttccagaccctgaggagagagtgtctg gagagcgggaaactcttcagtgacacatccttccctgctgattggaactctcttgggtac aatgagttgggtcgctactcttcaaaaacccggggcgttgagtggaaaagaccaaaggag ttgtgctcaaaccctcagttcattgttgaaggagccacgagaactgacatctgccaaggg gctttgggtgactgttggttgctggcagcccttgcctctcttaccttggacaaagacatc ttggctcgagtggtaccccctgggcagagctttgaggagaattatgctggcatctttcac ttccagttttggcagtatggacagtgggtggatgttgtgattgacgataggctgcccaca agagaggggaaactgctgtttgttcactcagctgagggctcagagtattggagcgccctg ctggagaaggcctatgctaaagtcaacagttcctatgaggccttgtctgggggctccacc acagaaggctttgaggacttcactgggggcatcgctgagacatataatcttggcaaggcc ccacagtgcctgttcaaaatcatgaagaaggccctggggctgggttctcttttgggctgc tccattgatataacaagtgcgtacgagacggaggcagtcactggtcagaagctggtgaag gggcatgcatactcaatcactgcagcagaagaggtacacctgcatgggactccagttgag ctggtgaggatcagaaacccctggggtcaggtggagtggacgggtgcctggagcgatgat tccagggaatgggatggagtacgaccggaggagaaatccaagctcgaccactctgcagaa gatggagagttttggatggcctactctgatttcctaaggcagtactccaagctggagatc tgcaacctgactccagacacgctggtcagtgatgaagtgggtcgctggaaccactaccag tttgaggggatgtggagggtaggctctaccgctggaggatgcaggaaccatgcagccaca ttctgctctaacccccagtttgccattaaattggatgatgtggatgatgaccctcatgat ggcaaggatggctgcaccttcttggtgggcctcatgcaaaaagacggccgcaaagagagg agattcagccgggacctcaacaccattggcttttcaatataccaggttcctgatgagtat aagggccgcaccaacatccacctgggcccagatgtgctgctgagacagaagtctgtggca atgagcaataccttcatcaacctgcgggagatctgtgaccgcttcaagttgccccccggg gagtacgtcatcatcccctccacgtttgagccgcacaagaagggcagcttcctcttgaga gtcttcgccgagaagcatgctgccaccagtccaatggaagaggatatcagtgtggaagtt gacgagcctgatattacagagggtgatgtggatccctacttcaaacgtctattcttgcag attgctggaagcgattccgaagtttctgcctttgaacttcaaaagattttaaacagagtg gtaactcagagatctcacgtcaaaactgatggatttagcctcgagacctgtcgtcacatc atcagtctgttggatatggatggcaatgcaaagttgggcctggttgagttccatactgtg tggactaagatccagaagtatttggaaatcttcaaaagtcacgactctgacaactctggc acgatgagcacccacgagatgagggaggcgttgactgaagcaggatttcagcttaacagc gaggtgctccagctaattgtgtcccgctacgctaactcagagtactccatggactttgac tgcttcatgggctgcctgatacgactggaaatgctatttaaaatgttcaaaacacttgac aaacatgacagtgggaagatcgaattggatgcattgcagtgggtctgcctgggcctcaat taa

Oncorhynchus tshawytscha (Chinook salmon): 112266436 Help Entry 112266436         CDS       T05605                                  Definition (RefSeq) calpain-2 catalytic subunit-like   KO K03853   calpain-2 [EC:3.4.22.53] Organism otw  Oncorhynchus tshawytscha (Chinook salmon) Pathway otw04141   Protein processing in endoplasmic reticulum otw04210   Apoptosis otw04217   Necroptosis otw04218   Cellular senescence otw04510   Focal adhesion Brite KEGG Orthology (KO) [BR:otw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     112266436  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     112266436    04217 Necroptosis     112266436    04218 Cellular senescence     112266436   09144 Cellular community - eukaryotes    04510 Focal adhesion     112266436  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:otw01002]     112266436 Enzymes [BR:otw01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.53  calpain-2      112266436 Peptidases and inhibitors [BR:otw01002]  Cysteine peptidases   Family C2: calpain family    112266436 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_8 EF-hand_1 Motif Other DBs NCBI-GeneID:  112266436 NCBI-ProteinID:  XP_024299675 LinkDB All DBs Position 2 AA seq 698 aa AA seqDB search MSGMASNLAKKRALAAGFGTNANAVKYLNQDFEALRAQCLNRGGLFSDPTFPAAPESLGF NELGPGSYKTRAVQWKRPGELCSSPEFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV MARVVPVGQSFGESYAGIFHFQFWQFGEWVDVVIDDRLPTKDGELLFVHSAEGSEFWSAL LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLRKPPPNMFQIIKKAIESGALLGC SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVTYRGRKEKLIRIRNPWGQVEWTGAWSDS SSEWNSVDDSERQNVKADDGEFWMSFTEFLRHYSRIEICTLTPDTLTDDSVKHWSVCNYD GSWRKGSTAGGCRNHAYTFWMNPQFVIRLDEEDDDPDDNEVGCSFVVGLIQKNRRRLRKV GEDMHTIGFAIYEVPSQFHGQREVHLDKNYFLTHAQKARSETFVNLREVSTRFKMPPGEY LIVPSTFEPHLNGDFCIRVFSEKQTETRPCDDPVKADLDDETVSDAEVDAGFRGLFTKLA GDDMEISAAELKTIMNKIVSKRTDIKTDGFSLETCRIMVNLMDDSGNGKLGLGEFATLWK KVQKYLGIYKKNDMDNSGTMSTPEMRMALKEAGFTLNNGIYQILVARYAEPDMTIDFDNF VACLMRLDMMFRVFMKIDAHDSGSIELDFHQWLTFTMI NT seq 2097 nt NT seq  +upstreamnt  +downstreamnt atgtctggaatggcgtctaacctagctaaaaagcgggcattggctgcagggtttggcact aatgctaatgcggtgaaatatctcaatcaggattttgaagcgcttagggcgcaatgttta aatcgaggagggctgttctcggatccaactttcccagccgcacccgaatctttgggcttt aatgaactcggaccaggctcgtacaaaactagagcagtgcaatggaaaaggccaggagag ttgtgctcaagtccagagttcattgttggaggagccaccagaacagatatctgtcaagga gctctaggtgactgttggcttttagctgccattgcctctttgacactcaatgaagatgtc atggctagagtggtccccgttggacagagctttggggaaagttacgctggcatttttcat tttcagttttggcagtttggggagtgggtggatgttgtcattgatgacaggctgcccaca aaagatggagagctgctgtttgttcactcagctgagggctcagagttctggagtgcactg ctggagaaggcctacgctaaggtgaatggctgctacgaggccctgtctgggggctccacc actgagggctttgaggacttcactgggggcattgcagagaactacgacctgaggaaaccc cctccgaacatgttccagattattaagaaggcaattgagtcaggggctctgcttggctgc tccattgacataaccagcgccgctgattctgaggcagtcacacgacagaagctggtgaaa gggcatgcctactccctaacaggggctgttgaggtgacctatcgtggccgtaaggagaag ctgatcaggatacgtaacccttggggtcaagtggagtggacaggggcttggagtgacagc tcctcagagtggaactccgttgatgattcagagcgccagaacgtcaaagctgatgatgga gaattctggatgtcatttacagagttcctgcggcattactctcgcatagagatttgcact ctgaccccagatacactaacggatgactctgtgaagcactggagtgtgtgtaactatgat ggtagctggaggaagggttccactgctggggggtgcaggaaccacgcctacaccttctgg atgaacccccagtttgtgatcaggctggatgaggaggacgatgaccctgatgataacgag gtgggctgcagcttcgtggtgggcctgatccagaagaaccggcgccggctgaggaaagta ggcgaagacatgcacaccattggctttgccatctatgaggttccatcacagtttcatggt cagagggaggttcacctggacaagaattatttcctgacacatgctcaaaaggcccggtct gagaccttcgtcaaccttcgggaggttagcacccgcttcaaaatgccccctggggagtac ctcattgtgccctccaccttcgagccgcacctaaatggtgacttctgcatccgtgttttc tcagagaagcagactgagactcgaccatgtgacgatcctgtcaaggcagacttagatgat gagactgtatctgatgctgaagtcgacgcaggatttagaggcttgtttacaaagcttgca ggagatgacatggagatctctgcagcagagctgaaaaccatcatgaataagattgtctcc aaacgaactgacatcaaaacagatggcttcagtcttgaaacctgtagaatcatggtcaac ctcatggatgacagtgggaatggaaaattgggccttggggaattcgctactctgtggaag aaagtgcagaaatacctgggtatctataagaagaatgacatggacaattcaggcaccatg agtactccagagatgcgtatggccctgaaagaagcaggcttcactttgaacaatggcatt tatcagatcctcgtggctcgctacgctgagccagacatgaccatcgactttgataacttt gtggcctgccttatgcgtctggatatgatgttcagagtctttatgaagattgatgctcat gacagtggctccattgagctcgacttccatcagtggctaacatttacgatgatctag

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