Oncorhynchus tshawytscha (Chinook salmon): 112224184
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Entry
112224184 CDS
T05605
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04520
Adherens junction
otw04916
Melanogenesis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112224184
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112224184
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112224184
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112224184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112224184
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
112224184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112224184
NCBI-ProteinID:
XP_024243323
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All DBs
Position
LG25:complement(10366467..10463600)
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AA seq
649 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQDEKISENLSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVNHGSLQSRQALKDARSPSPAHIVGPFCLEFPGQSDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQGDVDPKTGIPRPPQHPDISPYY
PLSPGSVGQLPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMQSFLSSRFPHHMV
PPHHSLHQTGIPHPAIVTPNVKQESSHSDIGLNSSTILYTLHRKHQDSKKEDEKKKQPHI
KKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLH
MQLYPGWSARDNYAGNQQGKKKKRKRDKQPGEGNEHREYFPNPCLSLPPITDLSAPKKCR
ARFGLDQQNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLDSPPSSPSSVAPSPSSKE
SKPQTEQMQPLSLTMKPAHQPLHHPHLLAGHPPTPSLVLLENSAAAAGKMPGAAHNGAHD
HGNVSSSRQPGSSGASLARPSAASLCHSHSLHPNSTAPQPLSLVTKSIE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatttgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggggagcaggatgaaaaaatttcggagaacttatcggcagaaagggat
ttagcagatgtcaaatcttctcttgtaaatgaatcagaaacaaatcaaaacagctcgtca
gattcggaggcggaaagacggcctccgcctaggtctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgatccccgatcttacaagcccgtaccttccgaatggatca
ctttctccaacagctcgcacatacctacagatgaaatggcctttgctagatgttaaccac
ggaagtcttcaaagtagacaagcacttaaagatgcccggtccccgtcaccagcacacatt
gttgggcccttctgcttggaattccccggacagtcagatctgagccttcaccaatttcag
ttgtctaataaagtcccagtggtacagcaccctcaccacgtgcacccgctcacgcctctg
atcacctacagcaatgagcacttcacaccgggcaacccccctccgcacctacagggagac
gtggaccccaaaacaggaattccaaggcctccacaacacccagacatatctccctattac
cctctatcgcctggctctgtagggcagctcccccatccgctaggctggttagtaccacag
caaggtcaacctgtttacccaatcacaacagggggttttagacacccctacccgactgca
ctcactgtcaatgcatccatgcaaagttttctgtcctccaggttccctcaccacatggtc
ccccctcaccacagtttgcaccagactggcatcccccaccctgccatcgtcacgcccaac
gtcaagcaggagtcctcccacagcgacataggcctcaacagctctactatactgtacaca
ctccacaggaaacaccaggactcgaaaaaggaggatgagaagaagaagcagccccacata
aagaagccgctgaacgccttcatgctctacatgaaggagatgagggccaaggtggtggcc
gagtgcacgttgaaagagagcgctgccatcaaccagatcctgggacgaaggtggcatgcc
ctaacacgagaggagcaggcgaaatactacgagctggcccggaaagagcgacagcttcac
atgcagctctacccaggctggtcagcacgagataactatgcgggtaaccaacagggcaaa
aagaagaagagaaaaagggataagcagccaggagagggcaatgaacacagagaatatttt
ccaaacccttgcctttcactccctccgattacagacctgagcgctcctaagaagtgtcga
gcgcgctttgggctcgatcagcagaataactggtgtggcccgtgcaggagaaaaaaaaag
tgcattcgctacatccaaggtgaaggcagctgtgccagtcctccctcttcggacggaagc
ttactagactcccccccatcctccccctcctcggtggccccctccccctcctcgaaagag
tccaaacctcagactgaacaaatgcaacctctctcactgactatgaaaccggcccaccag
cctctccaccacccgcacctcctggctgggcatcctcctacgccatctttggttctgctg
gaaaactctgctgctgcagcgggtaaaatgcctggcgcagcccacaatggagcccatgac
cacggcaatgtctcgtcctcgcggcaaccgggctcctcaggcgcctccctggccaggccc
tcggcagcatcgctgtgtcattcccactcgctacaccccaactccacggcccctcagcct
ctgtcgctcgtgaccaagtctatagagtag
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