Oncorhynchus tshawytscha (Chinook salmon): 112225951
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Entry
112225951 CDS
T05605
Name
(RefSeq) importin subunit beta-1 isoform X1
KO
K14293
importin subunit beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112225951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112225951
03036 Chromosome and associated proteins [BR:
otw03036
]
112225951
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112225951
Pre-60S particles
112225951
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112225951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
Cnd1
Arm
MMS19_N
DUF6869
pPIWI_RE_Y
Motif
Other DBs
NCBI-GeneID:
112225951
NCBI-ProteinID:
XP_042163102
LinkDB
All DBs
Position
LG27:6456898..6476641
Genome browser
AA seq
879 aa
AA seq
DB search
MELITILEKTVSPDRNELEAAQKFLEQAAIENLPTFLVELSKVLANPGNTQVARVAAGLQ
VKNSLTSKDPDVKTRYQQRWLAIDANARREIKNFVLQTLGTETYRPSSASQCVAGIACAE
IPVTQWPELIPQLVANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQDNANQILTAIIQG
MRKEEPSNNVKLAATNALLNSLEFTKANFDKETERHFIMQVVCEATQCPDTRVSIVRVAA
LQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEA
TEASEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLAT
CCEDDVVPHVLPFIKEHIKHPDWRYRDASVMAFGSILEGPELNQLKPLVIQAMPTLIELM
KDPSVVVRDTTAWTVGRICELLPEAAINEVYLAPLLQCLIEGLGAEPRVASNVCWAFSSL
AEAAYEATDAAEDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSAAYEALMEIVK
NSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQH
QDALQISDVVMASLLRMFQNTAGSGGVQEDALMAVSTLVEVLGADFQKYMDAFKPFLGIG
LKNYAEYQVCLAAVGLVCDLCRALMSNILPYCDEIMQLLLENLGNENVHRSVKPQILSAF
GDIALAIGGEFKKYLEIVLDTLQQASQAQVDKTDYDMVDYLNELREGCLEAYTGIIQGLK
GDQENVHPDVMLVQPRVEFILSFIHHIAEDEDHSDGVVANAAGLIGDLCTAFGKDVMKLV
ELRPLINDLLTEGRRSKTTKTKTLATWATKELRKLKSQA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagctgataacaatcctcgaaaaaactgtctctccagatcgaaatgaactggaggcg
gcacagaagtttctggagcaggcggcaattgagaatttgcccacgttcctggtggagctc
tccaaggtgctcgccaaccctggcaatacccaggtggctcgcgtggccgcagggctgcag
gtgaagaactcactcacctccaaggacccggacgtgaagacacgctaccagcagagatgg
cttgccatcgatgccaacgcccggagggagatcaagaactttgttctgcagaccctgggc
acggagacttaccggcccagctcggcctcccagtgtgtggctggtatcgcctgcgcagag
atccccgtcacccagtggcccgagctcattccccagctggtggccaacgtgacggacccc
agcagcactgagcacatgaaggagtccaccctggaggccattggatacatctgccaggac
atagaccctgagcagctgcaggacaacgccaaccagatcctgacagccatcatccagggc
atgaggaaggaggagcccagcaacaacgtcaagctggctgccaccaacgcgctgctcaac
tcactggagttcaccaaagccaacttcgacaaagagacggagaggcactttatcatgcag
gtcgtctgtgaggccacacagtgcccagacaccagagtgagtatcgtacgagtggctgcc
ttacagaacttggtgaagataatgtctttgtattatcagtacatggaaacgtacatgggt
ccggcactgtttgcgatcacaatagaagccatgaaaagtgacattgatgaagttgcctta
caaggaatcgagttctggtcgaacgtgtgtgacgaggagatggatttggccattgaagcg
actgaggcatcggagcagggccggcccccggagcacaccagcaagttctatgccaaagga
gccttgcaatacctggtgcccatcctcacccagacactcaccaaacaggacgagaacgac
gacgatgacgactggaacccgtgcaaggcggcaggcgtgtgcctgatgctgctggccacg
tgctgcgaggatgacgtggtgcctcacgtgctgcccttcatcaaggagcacatcaagcac
cccgactggcgctaccgcgacgcctcggtcatggcctttggctccatcctggaggggccc
gagctcaaccagctcaaacccctcgtcattcaggcaatgcccacgctgattgagctgatg
aaggaccccagtgttgtggtgagggacaccacggcctggacagtgggcaggatctgtgag
ctgctgccggaggcggccatcaacgaagtgtacctggcccctctgctgcagtgcctcatc
gagggcctgggggccgagccacgcgtcgcatccaacgtttgctgggccttctccagcctg
gcggaagccgcgtacgaagccacagatgcagcggaggaccaggaggagcctgccacgtac
tgcctctcctcctccttcgagctcatcgtccagaaactattagaaaccacagacaggccg
gacggtcaccagaacaacctgcgtagcgcggcctacgaggccctgatggagattgtgaag
aacagcgccaaggactgctacccagctgtgcagaagaccaccctggtcatcatggaacgc
ctgcagcaggtcctgcagatggagtctcacatccagagcacgtcggacagaattcagttc
aacgacctccagtctctactgtgtgccaccctgcagaatgtgctgaggaaggtgcagcac
caggacgcgttgcagatctcagacgtggtgatggcctccctgctcagaatgttccagaac
acagccggctccgggggcgtacaggaggatgcgctcatggccgtctcaaccttggtggaa
gttttgggcgctgactttcagaaatacatggatgcctttaaacccttcctgggaattgga
ctgaagaattatgcagaatatcaagtgtgtctggccgcggtgggcctggtgtgtgacctg
tgccgagccctaatgtccaacatcctgccttactgcgacgagatcatgcagctcctgctg
gagaacctggggaatgagaatgtgcaccggtcggtgaagccccagatcctgtcagcgttc
ggagacattgccctggccatcggaggagagttcaagaagtacctggagatcgtcctggac
accctgcagcaggcgtcgcaggcacaagtcgacaagacggactatgacatggtggactat
ctgaacgagctgcgggagggctgtctggaggcctacactggcatcatccagggcctgaag
ggggaccaggagaacgtgcaccctgacgtgatgctggtgcagcccagagtggagttcatc
ctgtccttcatccatcacatcgctgaagacgaggaccactctgacggcgtggtggcaaac
gctgccggacttataggagacctgtgcacggcctttgggaaggacgtgatgaagctggtg
gagctgcggcccctcatcaacgacctgctgacggagggccggaggtccaagaccaccaag
accaagacgctggccacctgggccaccaaggagctgcgcaagctcaagagccaggcctga
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