Oncorhynchus tshawytscha (Chinook salmon): 112226496
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Entry
112226496 CDS
T05605
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112226496
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112226496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226496
03400 DNA repair and recombination proteins [BR:
otw03400
]
112226496
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112226496
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
112226496
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
112226496
NCBI-ProteinID:
XP_024246621
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All DBs
Position
LG28:33318958..33321368
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AA seq
266 aa
AA seq
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MPAEILEKTSPSSVAATLSSVNGNPDKPRTASGDRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDNSRHSKLEKADILEMTVKHLRNMQRLQMTGAMSTDSSVLGKYRAGFSECMSE
VTRFLSTREGMNMEVMSQLLSHLAGCVSQINTVNYSTHRQSLTYPAHPAHPTLGQAIVQI
PSASPQLNVIMPCKSGSPINFTSEVAKFYSGLQIVSATDGQFAFLIPSVALAQMSVPNAL
HGNPTVALAVSPVAPPITADSVWRPW
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgaaattttggagaaaacttccccctcttctgttgcagccaccctgtcgagc
gtaaatggaaatccggataaaccaaggactgcctcgggggacagaaagtcttctaaacca
attatggagaagagaagacgcgcgcgaatcaacgaaagccttggacagctcaagaccctc
atactggacgctctaaagaaagataactccaggcattcgaagctggagaaggcagacatc
cttgagatgactgtgaagcacctaaggaatatgcagcgtcttcaaatgactggtgctatg
agcacggattcatcagtccttggcaagtacagagcgggattcagcgagtgcatgagtgaa
gtcacccgttttctgtccacacgtgaagggatgaacatggaggtcatgtcccaacttctc
agccacctagccggttgtgtgtcacagatcaacactgtaaactactcaactcatcgccag
agcctcacctaccctgcgcatccagcgcatccaacgcttggccaagccattgtgcaaatc
ccaagtgcgtcgcctcagttgaatgtaatcatgccttgcaaaagtggctcgccaatcaac
ttcacgtccgaagtggctaaattctacagcggacttcagattgtttcagcgacagatgga
caattcgcctttctgattccaagcgtggcccttgcgcaaatgagcgtgccaaacgcccta
catggcaatccaacagttgcgctggcggtgtcacctgttgcacctcccatcactgcagac
tccgtgtggagaccatggtag
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