Oncorhynchus tshawytscha (Chinook salmon): 112227058
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Entry
112227058 CDS
T05605
Symbol
agla
Name
(RefSeq) glycogen debranching enzyme isoform X1
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00500
Starch and sucrose metabolism
otw01100
Metabolic pathways
Module
otw_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112227058 (agla)
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
112227058 (agla)
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
112227058 (agla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
112227058
NCBI-ProteinID:
XP_024247627
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All DBs
Position
LG28:29785282..29824170
Genome browser
AA seq
1538 aa
AA seq
DB search
MSLQTKQVRVLVLNDMEQLGRTLFRLDQGFELQFRLGPTLQGKHVHVHTNYPAPGKHFDR
HTFQALAWHNPMGREDDSDKFCTLDLQIAGSYQYYFGHGHEEKSGGGYIVVDPVLRAGAD
NHHVHLDCITIQTYLSKCLGHLDDWPARLRVAKESGYNMIHFTPLQTLGISRSCYSLADQ
LSLNPEFSPPGKNYTWTEVGELVQKLKKEWNMICITDVVYNHTAANSPWIKEHPECGYNL
VNSPHLRSAWVLDRAIWHMTCNMADAKYAAMGLPAQVQNEGHLNAIRSVLWEHVFPKVKL
WEFFQVKIESTVEEFRTLLTEGVKPDQKKTDGKQGLKIIQDPKFRRFGNKVDMDSALETF
VPHSRSPQAILEACNWLWGRLEEINKEQYQQMLQHQEQAANCIVGNVVYERLADHGPKLG
PVTRKDPIVTRYFTFPFEEKSLEEDLLMMDQPDKARHFLAHNGWVMGDDPLRNFAEPGSN
VYIRRELICWGDSVKLRYGNKPEDCPYLWAHMQKYTEITAKHFAGVRLDNCHSTPLHVAE
YMLDVARVLRPSLYVVAELFTGNEDLDNVFVTKLGITSLIREAMSAGDSHEEGRLVYRYG
GEPVGAFVQPSLRPLVPSIAHAMFLDVTHDNECPIQLRSAYDSLPSSAIVSMACCCSGST
RGYDEMVPHQISVVKEERFYPKWNPEAKASSPGEVNLKTGIIAGKLALNKMHQELASKGF
NQVYVDQVDEDIVAVTRHCPSTHQSVVAVCRTAFHNPKHHQYRKEVPPMFIPGKIEEVIL
EARIIDRQAGTYKKCEKYINGMPEYTVEIKEHIQLKDSGVVKHAGVTSKGSSEFVQEIIF
ERLTPGSVIAFRVSLDPKAQGLVGVIRHHLIQFSPKYKPGSLPDQHTPTILETPLAQIMS
KLTLGDMNMLLFRCDSEEQEDGGGCYNIPSWTSFKYGGLQGLLSVMADIRPKNDLGHPVC
DNLRQGDWMIDYVSNRLVCHSGALGEVGKWLKAMFHYLKHIPRYLIPCYFDAILVGVYTT
ALDTTFNKMSSFVQNGSTFVKLLALGSVQMGGVGSFPALPPLSLELPDVPYRLNKDTGKK
EQCCISLAAGLPHFSSGIFRCWGRDTFIALRGLMLVTGRHLEARNIILAFAGTLRHGLIP
NLLGEGICARFNCRDAVWWWLQCIQDYCTLVPEGIAILRCPVVRMYPHDDSEPQVSGTPS
LLTQPLCDVIHEAMQRHMQGIDFRERNAGPKIDMHMKDEGFNVVAKVHRDTGFVYGGNRF
NCGTWMDKMGESDKARNKGMPATPRDGSAVEIVGLSKSAVRWLVELHKKGLFPHSSMKIH
RDGKEVKVSYEEWNHKILANFERNFYVSHDEKDPNEKHPDLVHKKGIYKDSHGASSPWCD
YQLRPNFCIAMVVAPELFTVERAWKALGIAEKKLLGPLGMKTLDPDDMVYCGVYDNALDN
DNYNVARGFNYHQGPEWLWPIGYFLRAKLYFAKKLGKETYEQTVYLVKSILSQHYVHLER
SSWKGLPELTNENGQYCPFSCESQAWSISTVLEVLHDI
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccagacaaaacaagtcagagtcctggtcctcaacgatatggaacagctggga
aggacactcttccgcctggaccaaggctttgagctccagttccgtctgggccctactctc
cagggaaaacatgtgcatgtgcacactaactaccctgctccaggcaaacactttgaccgt
cacaccttccaggccctggcctggcacaaccccatgggaagagaggacgactctgacaag
ttttgcaccctagacctacagatcgctggatcataccaatactactttggtcacggccat
gaggagaagtcaggcggtggctacatagtggtggacccagtgctgcgtgccggggctgac
aaccaccacgtccatctggactgtatcaccatccagacctacctgtccaaatgcctggga
cacctggatgactggccagccagactgagggtggccaaggagtctggctacaacatgatc
cacttcaccccactccagactctagggatatccaggtcctgctactctctagctgaccaa
ctaagcctgaacccagagttttcaccaccgggaaagaactacacctggacagaagtggga
gagttggtgcagaaactgaagaaagagtggaatatgatctgtatcactgacgtggtctac
aatcacacagccgccaacagcccgtggatcaaggagcatcctgagtgtggttacaacctg
gtcaactccccccacctgaggtcagcctgggtgctggaccgggccatatggcacatgacc
tgcaacatggctgacgctaagtacgctgctatgggcctccccgcccaggtccaaaacgag
gggcacctcaatgcgatccgcagtgttttgtgggagcatgtgttccccaaggtcaagctg
tgggaattcttccaggtcaaaattgagagcactgtggaggagttcaggaccctgctcaca
gaaggagtgaaaccagaccagaagaagactgatggtaaacagggacttaagatcatccag
gaccccaagttcagacggttcggaaataaagtggacatggactctgctctggagaccttt
gtgcctcacagccgcagtcctcaagccattctggaggcctgtaactggctgtgggggaga
ttggaggagatcaataaagagcagtaccagcagatgttacagcaccaggagcaggctgct
aactgcatcgtgggaaatgtagtttatgagcgcctggctgaccacgggcccaagctgggc
cccgtcaccaggaaagaccctattgttaccagatacttcaccttcccattcgaggagaaa
agcctggaggaagacctgctaatgatggaccagccagacaaggcccgtcacttcctggct
cacaacggctgggtgatgggagatgatcctcttaggaactttgctgagccaggctccaac
gtgtacattaggagagagttgatctgctggggcgacagtgtcaaacttcgctacggcaac
aagcccgaggactgtccctacctgtgggcccacatgcagaagtacacagagatcacggcc
aagcacttcgctggggtccgcctggacaactgtcactccacccctctgcatgtcgctgag
tacatgttggacgtggctcgtgtgttgaggcccagtctgtacgtggtggctgagctgttc
acaggcaacgaggacctggacaatgtctttgtgactaagctaggcattacctcgctcatc
agagaggcaatgagtgcaggggacagtcacgaggagggcaggcttgtgtaccggtacgga
ggggagcccgtcggggccttcgtccagcccagcctccgccccctggtgcccagcatcgcc
cacgccatgttcctggacgtcacccatgacaacgagtgccccatccagctccgctctgcg
tatgactcgctccccagttctgccatcgtctcaatggcctgctgttgctctggcagcacc
aggggatatgatgagatggtgcctcaccagatctcagtggtcaaggaggagcgtttctac
cccaagtggaaccctgaagccaaggcctcgtcacccggggaggtcaacttgaagacgggt
atcatcgctggcaagctggccctcaacaaaatgcaccaagaactggcttccaagggcttc
aaccaggtgtacgttgaccaggtggacgaggacattgtagcggtgacacgtcactgtccc
agcacccaccagtctgtggtggccgtgtgtcgcactgccttccataaccccaaacaccac
cagtacaggaaggaggttccccccatgtttatccctggtaaaattgaggaggtcattctg
gaggcgcgtatcattgaccggcaagccggcacctacaagaagtgcgagaagtacatcaac
ggcatgccggagtacaccgtggagattaaggagcacatccagctgaaagatagtggcgtt
gtaaaacacgcaggcgtgacgtctaagggcagcagtgagtttgtccaggagatcatcttc
gagcgcctcacccctggcagcgtcatcgctttcagggtgagtctggaccctaaggctcag
gggctggtgggagtcatcagacatcacctgatccaattcagccccaagtacaagcctggc
agtctgcctgaccagcacacaccaaccatactggagacaccactggcacagatcatgtct
aagctgactctgggcgacatgaacatgctgctgttccgctgtgactctgaggaacaggag
gacggaggaggctgctacaacatcccttcctggaccagcttcaagtacggtggcctgcaa
ggtcttctgtcagtgatggcggacattcgtcccaagaacgacctgggtcacccagtgtgt
gacaacctgagacagggggactggatgatcgactacgtcagtaacaggctggtgtgccac
agtggcgctctaggagaggtggggaagtggctcaaggcgatgttccattatctgaagcac
atccctcgctatctcatcccctgctactttgatgccattttagtgggagtctacaccacg
gctcttgacaccaccttcaacaagatgtccagtttcgtccagaacggctcgacctttgtc
aaactgctagctctgggctcggtccagatgggtggtgtgggaagtttcccggctctgcct
cccttgtccctggaactacccgatgtcccctaccgcctcaacaaggacaccggcaagaag
gagcagtgctgcatctccctggccgcaggtctgcctcacttctcctctggaatcttccgc
tgctggggccgagacaccttcattgctctgcgtggactcatgctggtcactggtcgtcac
ctggaggctagaaacatcatcctggcatttgcaggcaccctgagacacggtcttatcccc
aacctgttgggcgagggcatctgtgcccgcttcaactgccgtgatgccgtgtggtggtgg
ctgcagtgcatccaggactactgtaccttggtgcccgagggcattgccatcctccgctgc
cctgtggtcaggatgtacccccatgatgactctgagccccaggtctctggcactccgtcc
ctgctcacacagcccttgtgtgatgtcatccacgaggccatgcaacgtcacatgcagggt
atcgacttcagagagcgcaacgcaggaccaaagatcgacatgcacatgaaggacgagggc
ttcaatgttgtggccaaagtgcaccgtgatactggctttgtttacggtggcaaccgcttc
aactgcggaacatggatggacaaaatgggagagagtgacaaagctcgcaacaagggcatg
cctgcaacacccagagatgggtcagcggtggagattgtgggcctcagtaagtctgcggtg
cgctggctggtggagctccataagaagggcctgttcccccacagctccatgaaaatacac
cgggatggtaaggaggtgaaggtttcctatgaggagtggaaccataagatcttggccaac
tttgagaggaacttctatgtgtcccacgacgagaaggaccccaacgagaagcaccccgac
ctggtccacaagaaaggcatctacaaggacagccacggagcctccagcccctggtgtgac
taccagctcaggcccaacttttgcattgccatggtggtggctccggagttgttcactgtg
gagagagcctggaaggccctgggaattgctgagaagaagctgctaggacctctgggaatg
aagacgttggacccagatgatatggtgtactgtggtgtctatgacaacgccctggacaac
gataactacaacgtggccagaggtttcaactaccaccaaggaccggagtggctatggcca
attgggtacttcctgcgagcaaagctctattttgccaagaagcttgggaaggagacctat
gaacagacagtgtacctggtgaagagcattctctctcagcattatgtccacctggagagg
tctagctggaagggtctgccagagctgaccaatgagaatggccagtactgtcccttcagc
tgcgaatcacaggcctggtccatctccacggtgctggaagtcctccacgacatatag
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integrated database retrieval system
