Oncorhynchus tshawytscha (Chinook salmon): 112227572
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Entry
112227572 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase HECW1
KO
K12167
E3 ubiquitin-protein ligase HECW1 [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112227572
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112227572
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112227572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
112227572
NCBI-ProteinID:
XP_042164803
LinkDB
All DBs
Position
LG29:16543353..16608912
Genome browser
AA seq
1623 aa
AA seq
DB search
MASPSRSAQSRRRCKDAGTRYSYSPEQYPNGGPRHDHATALALQPRSTSDADLVTSDSRS
TLTVSTSHYAISQSQDMLICWDIKEEVDAGDWIGMYLIDEGLSENFLDYKNRGVNGSHKG
QIVWKIDTSSYFADSETKICFKYYHGVSGALRATTPSVTVKNASAPVLKPVVSQEVTQSL
GNRRLISFSLSDVQAVGLKKGMFFNPDPYLKIAIQPGKHSLYPALPHHGQEKRSRVVCNT
INPVWQRERFSFVSLPTDVLEIEVKDKFAKSRPIIKRFLGKLSMPVQRLLEKHAIGDRVV
SYSLGRRLPTDHVSGQLQFRFEMMSSIHPDDEDISLVMECPVVPDPDQLEVNQVDPVAPA
EIPAEDTLSMGPDTPELPLDGAPDLEDPEPSTTLAYVSLTEEAHPGDDVMEEEGVEEQVT
LVEMEESTVREVQVSSSEPQPGIEEQVSAEQLVEEREEEEETGAQEAQALSEEGEAQVQP
KPEGVEMELDSEEPTTAVEEPLEGATGPVPAEGVVEVVEEEGQQVVVEAKPRRVDCCCPA
RASPPMRSALRRKNRPCSLPVSELETVIASSCGDPETPRTHYIRIHHLLHSLPSAHQRQG
SGEEEEGEEEGGSSTEEPTIKPTSKDGEEGEGEEEEEEEGDASQSLASPSQVRECTAPCC
RSRTLPRSLSIERLSELNQLLDGGERGGRTLHPRLENEEAEVGGSGRGVRGSECELCDNS
CYSTSCYSTSCYSTSCYSNSGYEGRNRPCSHTRLSSVDSTRLSESTVFSSQDEEEEEEEN
SAFESVPDSIQSPDTREPGGDGTTAEWREETGEGTRGESPVAGPSDRTVGGDSYLPCGHP
PALRPDTHHYPTVDEPLPPNWEARIDSHGRVFYVDHVNRTTTWRRPTHAASKCNGIQRSS
STQQMEQLNRRYQNIQRTMATEDECGGRRLERSASTETETDSPPQAIEPRREGPSSPVSN
QKITLLLQCPAVKFITHPEFFTVLHANYGAYRIFTNSTCLKHMILKVRRDARNFERYQHN
RDLVIFLNKFADTQLELPRGWEIKTDPQGKSFFVDHNSRATTFIDPRIPLQNGRLPNHLT
HRQHLQRLRSYSAGEASDVSRSRVASLIHRPGNSLVAAIRSQYHPDSTPLGAPSYNDKIV
AFLRQPNIFEMLQERQPSLARNHVLREKIHYIKTEGSQGVEKLSCDADLVILLSLFEEEI
MSYVPPHSFHPGYSFSPRCSPGSSPQNSPGLQRARAPAPYRRDFEAKLRNFYRKLEAKGY
GQGPGKIKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYITFLGEEGLDYSGPSREFFFLL
SQELFNPYYGLFEYSANDTYTVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFT
RPFYKALLRLSTDLSDLEYLDEEFHQSLQWMKDNDITDILDLTFTVNEEVFGQVTERELK
SGGSNLQVTEKNKKEYIERMAKWRVERGVVQQTEALVRGFYEVVDSRLVSVFDARELELV
IAGTAEIDLNDWRTNTEYRGGYHDGHIVMRWFWGAVERFNNEQRLRLLQFVTGTSSVPYE
GFAALRGSNGLRRFCIEKWGKVTSLPRAHTCFNRLDLPPYPSYTMLYEKLLIAVEETSTF
GLE
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgtcgcgcagcgcccagagtcggcggcgctgcaaggacgctgggacgcgt
tacagctacagccctgagcagtaccccaacggtgggccccggcacgaccacgccaccgcc
ctggccctgcagccccgctctactagcgatgctgacctggtcacctcggacagccgctca
acgctgacagtcagcacctcccactacgccatcagccagtcccaggacatgctcatctgc
tgggacatcaaggaggaggtggatgccggggactggatcggcatgtacctcatagatgag
ggactgtcggagaactttctggactataagaaccggggagtgaacggctcccacaaaggc
cagatagtgtggaagatcgataccagctcctactttgcagattcggagactaagatatgc
ttcaagtattaccacggtgtgagcggagccctgcgagccaccacacccagtgtgacagtg
aagaatgcatctgcccctgtgctgaagccagtggtcagccaggaggtcacacagagtctt
ggcaacagaaggctcatcagtttctctctctcagatgtccaagcggtggggctgaagaag
ggcatgttcttcaaccctgacccctacctgaagatcgccatccagcccggcaagcacagc
ctctaccccgcgctgccccaccacggccaggagaaacgctcccgcgttgtctgcaacacc
atcaaccctgtttggcagagagagcgcttcagctttgtgtctttgcctacggacgtgttg
gagatcgaggtgaaggacaagtttgctaagagccggcccatcatcaaacgtttcctgggc
aagctgtccatgccggtgcagaggctactggagaaacacgccatcggggaccgtgtggtg
agctactctcttggccgcaggctgccgacggatcatgttagtggacagctgcagttcaga
tttgagatgatgtcctcaattcacccagatgacgaggacatctccctcgtcatggagtgc
cctgtggtccctgaccctgaccagttggaggtaaaccaggtggacccagtcgccccagca
gagatccctgccgaagacacattgagcatggggcccgacacacctgaactccccctagat
ggagccccagacttggaggacccggagccctccaccactctcgcttatgtctccctcaca
gaggaggcccatcctggggacgatgtcatggaggaggagggtgtggaggagcaggtcacc
ctggttgagatggaggagagtacagttagggaggtgcaggtatcttcttcagagccacag
cctgggatagaagagcaggtttcagctgaacaattggtggaggagagagaggaggaggag
gagactggagcccaggaggctcaagccctgtctgaggagggggaggcccaggtgcagcct
aaacctgagggtgtggagatggagttggacagtgaggaacctaccactgctgtggaggag
ccgttggaaggagccacggggcctgtgccggctgagggggtagtggaggtagtggaagag
gagggacagcaggtggtggtggaagccaaaccaaggagggttgactgttgctgcccagcc
cgcgcctcccctccaatgcggagcgccctgcggcgcaagaacaggccctgctcgctgccc
gtctcggagctggagacagtgatcgcctcatcgtgtggcgaccccgagacaccacgcacc
cactacatccgcatccaccaccttctccacagcctgccttcagcacaccaacggcagggc
agcggggaggaggaagagggggaggaggagggagggtcttctaccgaggagccgactatc
aaacccacctccaaggatggggaggaaggggaaggggaggaggaggaggaggaggaggga
gacgcgtcccaatccctggcgtccccctcccaggtgcgtgagtgcacagccccctgctgt
cgtagtaggactctcccccgcagtctgtccatcgagcgcctgtcagaactcaaccagctc
ctggatggaggggagaggggagggaggacgctgcacccacgcctggagaacgaagaggcg
gaagtgggcggaagcggccggggagtgagggggagcgagtgtgagttgtgcgacaactcc
tgctacagcacgtcttgttacagcaccagttgttacagcacctcctgctacagcaactct
ggctacgaggggcgcaaccgcccctgcagccacacacggctgtcgtcggtggacagcaca
cgcctctcagagagcaccgtcttctcctcgcaggacgaagaggaggaagaggaggagaac
agcgcctttgagtcggtgcctgactccatccagagccccgacaccagggagcctggcggc
gatgggacgacagcagaatggagggaggagacaggggaggggacgagaggggagtcgccg
gtggccgggcctagcgataggacagtaggaggagatagttacttgccatgcggtcatcct
cctgctttgcgacctgacacccaccattacccaactgttgatgaaccgttgcctccaaac
tgggaggcgcgcatcgacagccacggacgtgtcttctacgtggaccatgtgaaccgcacc
accacctggcggaggcccacgcacgccgcctccaagtgtaacggcatccagcgctccagc
tccacccagcagatggagcagctcaacaggaggtaccagaacatccagaggaccatggcg
acggaggatgagtgtggtggacggaggttggagagaagtgccagcacggaaacggaaaca
gactctccaccacaggccattgagccaaggagagagggcccctcatcccctgtcagcaac
cagaagatcaccctgctcctccagtgccctgccgttaagttcatcacccaccctgagttc
ttcacggtcctacacgccaactacggtgcctaccggatattcaccaacagtacctgtctg
aagcacatgatcctgaaggtcaggcgggacgcgcgcaactttgagcgctaccagcacaac
agagacctggtgattttcctcaacaagtttgccgacacacaactagagctgccccgaggc
tgggagatcaaaacagacccacagggcaagtcgtttttcgtggaccacaacagccgggcg
acaaccttcattgaccccaggatccccttacagaacggccgtctgcccaaccatctgacc
cacaggcagcacctgcagagactgcgcagctacagtgctggagaggcgtctgatgtgtcc
cggagtcgagtagcttccctgattcacagacctgggaacagcctggtagccgccatacgt
agccagtaccaccccgactccacaccgttaggtgcaccatcttacaatgacaagatagtg
gcgttccttcgccagccaaacatctttgagatgcttcaagagcgccagccgagcctggcc
aggaaccatgtactaagggagaagatccactacatcaagacggaaggttcacagggggtg
gagaagctgtcttgtgatgctgacctggtcattctactgagcttgtttgaggaggaaatc
atgtcctatgttccaccccactcctttcacccggggtacagcttctcgccccgctgctca
cccggatcctcgccacaaaactccccaggcttacagagggcccgagctccggctccatac
cgcagagactttgaagccaaactgcgtaacttttacaggaagctggaagctaagggctat
ggccaggggccagggaagatcaaactgatcatcagaagagaccacctgttggagggcacc
ttcaaccaggtgatggcctactcccgcaaggagctgcagaggaacaagctctacatcacc
ttcctgggagaggaggggctggactacagcggcccctccagggagttcttcttcctgttg
tcccaagagctattcaacccttactacggcctgtttgagtactcagccaacgacacttac
accgtccagatcagccccatgtctgccttcgttgagaaccatctggaatggttccgcttc
agtgggcgtattctaggcctggccctgatccaccagtatctgctggatgccttcttcaca
cgacccttctacaaggccctcctcagactatccacagacctgagtgatctggagtatctg
gatgaggagttccatcagagtctccagtggatgaaggacaatgacatcactgacatcctg
gacctcaccttcaccgtcaatgaggaggtctttggccaggtgacggagcgggagctaaag
tcgggtggctccaaccttcaggtgacggagaagaacaagaaggagtacattgagcgcatg
gccaagtggagggtagagcgcggggtggtgcagcagactgaggccctggtccgaggcttc
tatgaggtggtagactctcgtctggtgtcggtgtttgatgccagagagctggagctggtc
attgcagggacggctgagatcgacctaaacgactggaggaccaacacagagtacagagga
ggttaccatgatggccacatagtgatgcggtggttctggggcgcggtggaacgcttcaac
aacgagcagagactgcggctgctacagtttgtgactggcacctccagcgttccatacgaa
ggcttcgctgccctacggggaagcaacggcctacgacgcttctgcatcgagaagtggggc
aaggtcacctcactacccagggctcacacgtgcttcaaccgcctggaccttccaccttac
ccctcctacaccatgctgtatgagaaactgctgattgctgtggaggagaccagtaccttt
ggcctggagtga
DBGET
integrated database retrieval system
