Oncorhynchus tshawytscha (Chinook salmon): 112228022
Help
Entry
112228022 CDS
T05605
Symbol
tubb6
Name
(RefSeq) tubulin, beta 6 class V
KO
K07375
tubulin beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112228022 (tubb6)
09144 Cellular community - eukaryotes
04540 Gap junction
112228022 (tubb6)
09142 Cell motility
04814 Motor proteins
112228022 (tubb6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112228022 (tubb6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112228022 (tubb6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112228022 (tubb6)
04147 Exosome [BR:
otw04147
]
112228022 (tubb6)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112228022 (tubb6)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112228022 (tubb6)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112228022 (tubb6)
Exosomal proteins of colorectal cancer cells
112228022 (tubb6)
Exosomal proteins of bladder cancer cells
112228022 (tubb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
112228022
NCBI-ProteinID:
XP_024248908
LinkDB
All DBs
Position
LG29:7033890..7045966
Genome browser
AA seq
453 aa
AA seq
DB search
MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGNYVGNSSLQIDRINVYYNEASAHKYV
PRAILVDLEPGTMDSVRSGSFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKLREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYCALTVPELTQQMFDARNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIAPRG
LKMASTFIGNSTAIQELFKRFSEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATANDGEETFDDEEEDLNEEWNLEAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatagttcacatacaagccggacaatgtgggaatcagattggcaccaagttt
tgggaagttatcagcgatgaacacggcatcgatccggcaggaaactatgtgggtaactca
tcgcttcaaatcgacaggattaatgtgtactacaacgaagcgtccgcacacaagtatgtc
cccagagcaatccttgtggacctggaaccggggaccatggacagtgtccggtcggggtct
tttggacagctattcagacctgacaactttatcttcgggcagactggtgcggggaacaac
tgggccaagggccactacactgagggagcagagctggtagactctgtgctggatgtggtg
aggaaggagtgtgagcactgtgactgtctccagggcttccagctcacccactccctgggt
gggggcacgggctcaggcatgggcaccctgctcatcagcaagctccgtgaggagtacccc
gaccgcatcatgaacacgttcagcgtcatgccctcacccaaggtgtctgatacggtggtc
gaaccgtacaacgccacgctctctgtgcaccagctggtggagaacacggacgagacgtac
tgcattgacaacgaggcgctctacgacatctgcttccgtaccctaaaactgaccacaccc
acttacggagacctcaaccacctggtgtcggccaccatgagcggtgtgaccacctcactg
cgcttccctggccagctcaacgccgaccttcgcaaactggccgtcaacatggtgcccttt
ccccgcctacatttcttcatgcctggctttgcaccactaaccgcccgggggagccagcag
tattgcgccctgacagtgcccgaactcactcagcaaatgtttgatgcccgcaacatgatg
gcagcttgcgacccgcgccatggccgctacctcaccgtggccactgttttccgagggccc
atgtccatgaaggaggtggacgagcagatgctggccatccagaacaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaaggtggccgtgtgtgacattgcaccccgcggc
cttaagatggcctccacattcatcggcaacagcacggccatccaggagctgttcaagcgc
ttctcggagcagttctcggccatgttccgccgcaaggccttcttgcactggttcaccggg
gagggcatggacgagatggagttcacagaggccgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggaggccacggctaatgacggggaagagacattcgacgacgaa
gaagaagatctcaatgaggaatggaaccttgaagcccaatag
DBGET
integrated database retrieval system
