Oncorhynchus tshawytscha (Chinook salmon): 112229535
Help
Entry
112229535 CDS
T05605
Definition
(RefSeq) focal adhesion kinase 1-like isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04012
ErbB signaling pathway
otw04370
VEGF signaling pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
112229535
04370 VEGF signaling pathway
112229535
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112229535
09142 Cell motility
04810 Regulation of actin cytoskeleton
112229535
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112229535
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112229535
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
112229535
Protein kinases [BR:
otw01001
]
Non-receptor tyrosine kinases
FAK family
112229535
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112229535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_N_2
FERM_M
FERM_F2
Kinase-like
Motif
Other DBs
NCBI-GeneID:
112229535
NCBI-ProteinID:
XP_024251188
LinkDB
All DBs
Position
31
AA seq
1140 aa
AA seq
DB search
MEGLYHDISRISYYTEYDRHLAHSKGMATAYLDPNLNHALAGGAKSRLSAGTATERAPGA
PDRVLKVFHHFESNSEHSTWASNIRHGDATDVRGIIQKILDIHKVKCVACFSLRLSHSQS
GQVHWLHPDMGVSHVREKYEQNRSQEEWRYELRIRYLPKGFLHHFSEDKPTLNYFYQQVK
NDYMVEIADQVEQDIALKLGCLEIRRFFREMRGNALDKKSNYELLEKDVGLRRFFPKSLL
DSVKAKTLRKLIQQTFKQFANMNDDQSILKFLEILAPVYRYDKECFKCALGLSWVIQVEL
AIGPEEGISYLTDKGSTPTHLANFTQVQTIGYSVMEDKERKGMLQLNVAGAAEPLTVTTP
SLTTAENMADLIDGYCRLVNGVTQSFIIRPQKEGERALPSIPKVPNNEKRIVEGVVRSAG
VRAISVSDSVNSVTPTPPKPAKARRFLLPFVFCAHDSPPKEDCSGDETDDYAEIIDEDDT
YTMPSTVSYGVDEARDYEIQRDRIELGRCIGEGQFGDVHQGVYNSPENPTLNVAIKTCKN
CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTMGELRSFLQVRKYNL
DLSTLILFSHQLSTALAYLESKRFVHRDIAARNVLVSSTDCVMLGDFGLSRYMEDSSYYK
ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENG
ERLAMPHNCPPTLYSLMTKCWAYDPSKRPRFTELKTQLSTILEEEKAQQEERLRMEMRRQ
VTVSWDSGGSDEAPPKPSRPGYPSPRSSEGFYPSPQHAGQLNHYQVGYPGPHGMPAMPSG
GYPPQAGVLDPHETWNHHRPGDVPMWSPNMEDGGVLDLRGLGQVLPPHLMEERLMMQQQQ
MEEDQRWLEQEECFLKPESRNSRGSIDREDCSLQGPTGNQHIYQPVGLGKPEHVAPPKKP
PRPGAPSHLGSLASLNPVDSYNEGVKPWRIQPQEISPPPTANLDRSNDKVYENVTGLVKA
VIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPVLPASTHREIEMAQKLLNSDL
AELINKMKLAQQYVLTSLQQDYKKQMLTAAHALAVDAKNLLDVIDQARLKMIHAQSRGSH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactctatcacgatatttcaagaatttcctactacacagaatatgacagacac
ctagctcacagcaaaggtatggcgacagcttacctggaccccaacctcaaccacgccctg
gctgggggggccaagtcgcgcctcagtgcgggcacggccacggagcgggctcccggggcc
cctgacagggtcctgaaggtcttccatcacttcgagagcaatagcgagcatagcacatgg
gccagcaacatccgccatggggacgccaccgatgtcagggggatcatccagaagattttg
gacatccacaaggtgaaatgcgtggcgtgcttcagcctgcggctcagccactcccaatcc
ggccaggtccactggctccaccctgatatgggcgtgtcccacgtgagggagaaatacgag
cagaaccgctcccaggaggagtggaggtatgaactgcgtattcgctaccttccaaaagga
ttcctgcaccacttcagtgaagataaacccacactcaactacttctaccagcaggtgaaa
aatgactacatggtagagatagccgaccaggtcgagcaagacattgcacttaagttggga
tgccttgaaatcaggagattcttccgggagatgcggggaaatgccctggacaagaaatca
aactatgaactattagaaaaagatgtgggcttaagaagattcttccccaagagtttactg
gattcagtcaaggccaaaaccctgcggaagctgattcagcagacgttcaaacagtttgcc
aacatgaatgatgaccagagcatcctcaagttcctggagattctggcgcccgtttacaga
tatgataaggagtgttttaaatgtgctctcgggttgagctgggtcatccaagtagagcta
gccattggacccgaggagggcattagctaccttacagacaagggttcgactccaacacac
ctggccaacttcacccaggtgcagaccattggatactccgtcatggaggacaaggagagg
aagggcatgctgcagctcaacgtggccggtgctgctgagcctctcacagtgaccacgccg
tcactcaccacagctgaaaacatggccgacctcatagacggctactgtcgcctggtaaac
ggagtcacccagtccttcatcatacggccgcagaaagagggagagagagcactgccttca
atccccaaggtgcccaacaatgagaagaggatagtagagggggtggtccggagcgccggg
gtgcgtgccatctctgtctcagattctgtgaactctgtgaccccgacgcctcctaaacct
gctaaagccaggcgctttctccttcctttcgtcttctgtgcccatgactctccgccaaag
gaggattgtagtggggatgagacggatgactatgctgagattatagacgaagacgatacc
tacaccatgccctcaacagtgagctatggagtagatgaagccagggactatgagatccag
agagacaggatagagctgggacgctgcatcggtgagggacagtttggagacgtccaccag
ggagtctacaacagcccggagaatcccactctaaatgtggccattaaaacatgcaagaac
tgcacgtcggacagcgtgcgcgagaagttccttcaggaagcactgaccatgcgtcagttc
gaccacccccacatagtgaagctgattggtgtgatcacagaaaaccctgtgtggatcatc
atggagctgtgcacgatgggagagttgaggtcatttttacaagtaaggaagtacaacctg
gacctatcaacgttgatcctgttctcccaccagctcagcacagctttggcctacctggag
agcaaacgctttgtccatagggacattgctgccaggaacgtgctagtgtcttccacagac
tgtgtgatgctgggagactttgggctctcacgctacatggaagactcctcctactacaaa
gcttccaaagggaaactgccaatcaaatggatggctccagagtccatcaacttcagacgc
tttacctcagccagcgacgtgtggatgtttggtgtgtgtatgtgggagatcctcatgtac
ggtatcaagcccttccagggggtaaagaacaatgatgtcatcgggcggatagagaacgga
gagcgtctggccatgccccacaactgtccccccaccctgtacagcctgatgaccaagtgc
tgggcctacgaccccagcaagagaccccgcttcacagagctcaaaacccagctcagtact
atcttagaggaggagaaggcccagcaggaggagagactaaggatggagatgagacgtcag
gtcactgtgtcctgggactcagggggctccgacgaggccccccctaaacctagcagacct
ggttaccccagccctcggtctagtgaaggattctaccccagccctcagcacgctgggcag
ctcaaccattaccaggttgggtaccctggcccccacggcatgcccgccatgcccagtggc
gggtaccctccccaggccggtgtcctggacccccatgagacctggaaccaccaccggcca
ggggatgtccccatgtggtcccccaacatggaggatggaggtgtgttggacttgcgtggt
ttgggccaggtgctgcccccacacctgatggaggagaggctgatgatgcagcagcagcag
atggaggaggaccagcgctggttggagcaggaggagtgcttcctgaagccagaatccagg
aactcgcggggcagcattgaccgggaggactgcagtctccaggggccgacgggaaaccaa
cacatataccaaccagtgggactggggaaaccagagcatgtggcccctcctaagaagcct
cctcgtcctggagcccccagccacctgggcagtctggccagcctcaaccctgtagacagc
tacaacgagggggtcaagccctggaggatccaacctcaggagatcagccctccccccacg
gccaacttggaccgctccaacgacaaggtgtatgagaacgtgacaggcctggtcaaggct
gttatagagatgtccagtaagatccagccagcccctccagaggagtacgtcccaatggtc
aaggaggtgggactagctttgagaaccctattggccacagtggacgagaccataccagtg
ttaccagcaagcacacacagagagattgagatggcccagaagctcttgaactctgacctg
gccgagctgatcaacaagatgaagctggcccagcagtatgtcctcaccagcctgcagcag
gactacaagaaacaaatgctgactgctgcacatgccctggctgtggatgccaagaacctg
ctggacgtcatcgaccaggcccggctcaagatgatccatgcccagtcccgggggtcacac
tag
Oncorhynchus tshawytscha (Chinook salmon): 112245979
Help
Entry
112245979 CDS
T05605
Definition
(RefSeq) focal adhesion kinase 1-like
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04012
ErbB signaling pathway
otw04370
VEGF signaling pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
112245979
04370 VEGF signaling pathway
112245979
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112245979
09142 Cell motility
04810 Regulation of actin cytoskeleton
112245979
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112245979
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112245979
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
112245979
Protein kinases [BR:
otw01001
]
Non-receptor tyrosine kinases
FAK family
112245979
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112245979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_N_2
FERM_M
FERM_F2
Kinase-like
Motif
Other DBs
NCBI-GeneID:
112245979
NCBI-ProteinID:
XP_024269997
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MEGLYHDISRISYYTEYDRHLAHSKGMATAYLDPNLNHALAGGAKSRLSAGTGTATERAP
GAPDRVLKVFHHFESNSEHSTWASNIRHGDATDVRGIIQKILDIHKVKCVACFGLRLSHS
QSGQVHWLHPDMGVSHVREKYEQNRSLEEWRYELRIRYLPKGFLHRFSEDKPTLNYFYQQ
VKNDYMVEIADQVEQDIALKLGCLEIRRFFREMRGNALDKKSNYELLEKDVGLRRFFPKS
LLDSVKAKTLRKLIQQTFKQFANMNDDQSILMFLEILAPVYRFDKECFKCALGLSWVIQV
ELAIGPEEGISYLTDKGSTPTHLANFTQVQTIGYSVMEDKEREGMLQLNVTGAAEPLTVT
TPSLTTAENMADLIDGYCRLVSGATQSFIIRPQKEGERALPSIPKVPNNEKKVVEGVVRS
AGVRAISVSEDCSGDETDDYAEIIDEEETYTMPSTVSYGVDEARDYEIQRDRIELGRCIG
EGQFGDVHQGVYNSPENPTLNVAIKTCKNSTSDSVREKFLQEALTMRQFDHPHIVKLIGV
ITENPVWIIMELCTMGELRSFLQVRKYNLDLSTLILFSHQLSTALAYLESKRFVHRDIAA
RNVLVSSTDCVMLGDFGLSRYMEDSSYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG
VCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMPHNCPPTLYSLMTKCWAYDPSKRPRF
TELKTQLSTILEEEKAQQEERLRMEMRRQVTVSWDSGASDEAPPKPSRPGYPSPRSSEGF
YPSPPHAGQLNHYQVGYPGPHGIPAMPSGGYSPQAGVLDPQEAWNHHRPGDVPMWSPNME
DGGALDMRGLGQALPPHLMEERLMIQQQQMKEDQRWLEQEECFLQPESRNSRGSIDREDC
SLQGPTGNIYQPVGLGKSEHVAPPKKPPRPGAPSHLGSLASLNPLESYNEGVKIQPQEIS
PPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDE
TIPVLPASTHREIEMAQKLLNSDLAELINKMKLAQQYVLTSLQQDYKKQMLTAAHALAVD
AKNLLDVIDQARLKMIHTQSRGSH
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactatatcacgatatttccagaatttcctactacacagaatatgacagacac
ctagcgcacagcaaaggcatggcgacagcatacctggaccccaacctcaaccacgccctg
gctgggggggccaagtcgcgcctcagcgcgggcacaggcacggccacagagcgagccccc
ggggctccagacagggtcctgaaggtcttccatcacttcgagagcaacagcgagcacagc
acatgggccagtaacatccgccatggggacgccaccgatgtcagggggatcatccagaag
attttggacatccacaaggtgaaatgcgtggcgtgctttggcctgcgtctcagccactcc
cagtccggccaggtccactggctccaccctgatatgggtgtgtcccatgtgagggagaag
tatgagcagaaccgttccctggaggagtggagatatgagctgcgtattcgctaccttcca
aagggattcctgcaccgcttcagtgaagacaaacccacactcaactacttctaccagcag
gtgaaaaatgactacatggtggagatagcggatcaggttgagcaagacattgcacttaag
ttgggatgccttgaaatcaggagattcttccgggagatgcgaggaaatgccctggacaaa
aaatcaaactatgaactattagaaaaagatgtgggcttaagaagattctttcccaagagt
ttactggattcagtcaaggccaaaaccctgcggaagctgatccagcagacattcaaacag
tttgccaacatgaatgatgaccagagcatcctcatgttcctggagattctggcgcccgtc
tacagattcgataaggagtgttttaaatgtgctctcgggttgagctgggtcatccaagta
gagttagccatcggacctgaggagggcattagctaccttacagacaagggctcaactcca
acccacctggccaacttcacccaggtgcagaccattgggtactccgtcatggaggacaag
gagagggaaggcatgctgcagctcaatgtgaccggtgctgctgagcctctcacagtgacc
acgccgtcactcaccacagctgaaaacatggccgacctcatagacggctactgtcgcctg
gtcagcggagccacccagtccttcatcatacggccacagaaagagggagagagagcattg
ccatcaatccctaaggtacctaacaatgagaagaaggtggtagagggggtggtccggagc
gctggggtgcgtgccatctctgtctcagaggattgtagtggggatgagacggacgattat
gctgagattatagacgaagaggaaacctacaccatgccttcaacagtgagctatggagta
gacgaagccagggactatgagatccagagagacaggatagagctgggacgctgcatcgga
gagggacagtttggagacgtccaccagggagtctacaacagcccggagaatcccactctg
aacgtggccattaaaacgtgcaagaactccacatcggacagcgtgcgtgagaagttcctt
caggaagcattgaccatgcgtcagttcgaccacccccacatagtgaagctgatcggtgtg
atcacagagaacccagtgtggatcatcatggagctgtgcacgatgggagagttgaggtcc
tttttacaagtaaggaagtacaacctggacctgtcaacgttgatcctgttctcacaccag
ctcagcacagccttggcctacctggagagcaaacgctttgtccatagggacattgctgcc
aggaacgtgctagtgtcttccacagactgtgtgatgctgggagactttggcctctcgcgt
tacatggaggacagctcctactacaaagcttccaaagggaaacttccaatcaaatggatg
gctccagaatccatcaacttcagacgctttacctcagccagcgatgtgtggatgtttggt
gtgtgcatgtgggagatcctcatgtacggtatcaagcccttccagggcgtgaagaataac
gatgtcatcgggcggatagagaacggagagcgtctggccatgcctcacaactgccccccc
accctgtacagcctgatgaccaaatgctgggcctacgaccccagcaagagaccccgcttc
acagaactcaaaacccagctcagtacaatcctggaggaggagaaggcccagcaggaggag
agactgaggatggagatgagacgtcaggtcactgtgtcctgggactcaggggcctctgac
gaggccccccctaaacccagcagacctggttaccccagccctcggtctagtgaaggattc
taccccagccctccgcatgctggacagctcaaccattaccaggttgggtacccaggccct
catggcattcccgctatgcccagtggagggtactctccccaggccggtgttctggaccct
caggaggcctggaaccaccaccgaccaggagacgtccccatgtggtcccccaacatggag
gacggaggtgcgttggacatgcgtggtctgggccaggcgctgcccccccacctgatggag
gagaggctgatgatacagcagcagcagatgaaggaggaccagcgctggttggagcaggag
gagtgcttcctgcagccagaatccaggaactcgcggggcagcattgacagggaagactgc
agtctccaggggccgacaggaaacatataccaaccagtgggactggggaaatcagagcat
gtggcccctcctaagaagcctcctcgtcctggagcccccagccacctgggcagtctggcc
agcctcaaccctttagaaagctacaacgagggggtcaagatccagcctcaggagatcagc
cctccccccacggccaacttggaccgctccaacgacaaggtgtatgagaacgtgacaggc
ctggtcaaggctgttatagagatgtccagtaagatccagccagcccctccagaggagtac
gtcccaatggtcaaggaggtgggactagcgttgagaaccctattggccacagtggacgag
accataccagtgttaccagcaagcacacacagagagattgagatggcccagaagctgttg
aactctgacctggccgagctgattaacaagatgaagctggcccagcagtacgtcctcacc
agtctgcagcaggactacaagaaacagatgctgacggcggcccacgccctggccgtagac
gccaagaacctgctggacgtcatcgaccaggcccggctcaagatgatccacacccagtcc
cgggggtcacactag
DBGET
integrated database retrieval system
