Oncorhynchus tshawytscha (Chinook salmon): 112229553
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Entry
112229553 CDS
T05605
Name
(RefSeq) ras-related GTP-binding protein C
KO
K16186
Ras-related GTP-binding protein C/D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112229553
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112229553
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Gene cluster
GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
SRPRB
GTP_EFTU
Ras
MMR_HSR1
AAA_14
DUF815
Motif
Other DBs
NCBI-GeneID:
112229553
NCBI-ProteinID:
XP_024251222
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Position
LG31:complement(18974024..18978463)
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AA seq
384 aa
AA seq
DB search
MSIQYEEPALARNYGVVDSFPKDFGYGVEEPDIEEESTTSGDSKPRILLMGLRRSGKSSI
QKVVFHKMSPNETLFLESTNKIYKDDISSSSFVNFQIWDFPGQVDFFDPTFDYEMIFRGT
GALIFVIDAQDDYVEALGRLHLTVSRAYRVNPEINFEVFIHKVDGLSDDHKIETQRDVHQ
RANDDLADASLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLVNIFISNSGIE
KAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLREDGNGSAYDKESLAI
IKLNNTTILYLKEVTKFLALVCILREESFEKKGLIDYNFHCFRKAIQEVFEVGSLTQRTG
RLQPSSSNNSLSSVKLGVLNGSAV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcagtacgaggagcctgcattggctcggaattatggtgttgtggactctttc
ccaaaggattttggctacggagtagaggaaccagatatcgaggaggagagcacgacatca
ggtgacagtaaaccaaggatcctgctgatgggattgcggagaagtggaaagtcatctatt
caaaaggttgtattccacaagatgtcgcctaacgagacgctgttcttggagagcaccaac
aaaatctacaaggatgacatctccagcagctctttcgtcaattttcaaatctgggacttc
cctggtcaggtggacttttttgaccctacctttgactatgagatgatcttcaggggcacg
ggggctttgatattcgtcattgatgctcaggatgattatgttgaagccttggggaggcta
catctcacagtgtccagagcctacagggtcaacccagagatcaactttgaggtgtttatc
cataaggttgatggcctgtcagacgaccacaagatagaaacccaaagagacgtccatcag
agagccaacgatgacctggcagatgccagcctggagaagcttcatctcagcttttatttg
accagcatctatgaccactctatatttgaggctttcagtaaagttgtccagaagctcatt
cctcagctaccaacattggaaaaccttgtgaacattttcatatcaaattctgggattgag
aaagccttcctgtttgacgtggtcagtaagatttacatcgccaccgacagctcccctgtg
gacatgcagtcatacgagctttgttgtgacatgatcgatgttgtcattgacgtctcttgt
atctatggcctgagggaagatggaaatggcagtgcatatgataaagagtctttggccatc
attaagctcaacaataccaccatactctacctgaaagaggtcaccaagttcctagccctt
gtttgcatccttagagaggagagctttgaaaagaaaggtttaatagactataacttccat
tgtttccgcaaagccatccaggaggtgtttgaagtggggtccttgacacagaggacaggc
agactacagccaagttcgtccaacaacagcttgtccagcgtaaaacttggtgtattaaac
ggaagtgctgtttag
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