KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112235692Help
Entry
112235692         CDS       T05605                                 

Definition
(RefSeq) LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00020  Citrate cycle (TCA cycle)
otw00190  Oxidative phosphorylation
otw01100  Metabolic pathways
otw01200  Carbon metabolism
Module
otw_M00009  Citrate cycle (TCA cycle, Krebs cycle)
otw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
otw_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    112235692
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    112235692
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     112235692
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA FAD_binding_3
Motif
Other DBs
NCBI-GeneID: 112235692
NCBI-ProteinID: XP_024259941
LinkDB All DBs
Position
Unknown
AA seq 674 aa AA seqDB search
MASVSRVLTKRILSTKALPAAAARCSSRNXHFSIYGKKDNSKCQMLQYYSDPQISTQYPV
VDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTCPIQGGINAALGNMEGD
DWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQS
LNFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEEGECRGVIAL
CMEDGSIHRFRSNNTVIATGGYGRTYFSCTSAHTSTGDGNAMVNQSGLPXQDLEFVQLPP
LRCDVTLSGIYGAGCLITEGSRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIE
IREGRGCGPEKDHVYLQLHHLPHQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNM
GGIPTNYKGQVITHPDGEDKVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALT
IADTCTPGEKLSPLKPSAGEESVANLDKIRFADGNIRTSEIRLNMQRTMQTHAAVFRTGD
VLKEGCDKMDAIYQTMEDIKTFDRGMVWNTDLVESLELQNLMLNAVQTIHSAEARKETRG
AHAREDYKDRMDELDYARPLAGQERKPFEQHWRKHTMSTVDPQTGEVTLEYRPVIDTSLD
QGECSAVPPAIRSY
NT seq 2025 nt NT seq  +upstreamnt  +downstreamnt
atggcaagtgtatccagagtcctgaccaagaggattttatcaactaaagccctccctgct
gcagccgcccgatgtagctccaggaacnaccacttctccatctatgggaagaaggacaac
tcaaagtgccagatgcttcaatattattctgatcctcagatctcaacccagtacccggta
gtggatcacgagtttgatgcggtggtggtaggggctgggggagcaggtctgagagctgct
tttggtctgtctgaggctggcttcaacacggcctgtgtcaccaagctgttccccactagg
tctcacacttgtccaatccagggtgggatcaatgcagccctgggtaacatggagggagat
gattggaggtggcacttctacgacacagtgaagggatctgattggctaggggaccaggat
gctatccactacatgacagagcaggccccagctgccgtggtggagctggagaactttgga
atgcccttcagtcggacagatgatgggaagatctatcagagggccttcgggggtcagagc
ctgaattttggaaagggaggccaagcacaccgatgctgctgtgtagctgacaggactgga
cactcccttcttcacacattgtatggacggtccttaaggtatgataccagctactttgtg
gagtactttgccctggacctgctgatggaggagggtgaatgcagaggagtgatcgctctc
tgtatggaggatggatccatccaccgcttcagatccaacaacactgtcatcgctactggt
ggttatggccgtacctacttcagctgtacctcagcccacaccagcaccggggatggcaac
gccatggtaaaccagtctggcctaccatgacaggacctagagtttgtacagttgccaccc
ctacgctgtgatgtaaccctgtcaggtatctatggtgccggctgcctcatcactgagggt
agccgtggcgagggagggatcctcatcaacagtgaaggagagcgctttatggaacgctac
gctcccaacgccaaagatctggcctcccgggatgtggtgtcacgctccatgaccattgag
atccgtgagggaaggggttgtggtccagagaaggaccatgtgtacctgcagttgcaccac
ctgccccaccagcagctggccacccgcctgcctggtatctctgagaccgccatgatcttt
gctggggttgacgtcaccaaagagcccatccctgtcctgcccaccgtccactacaacatg
ggaggaatccccactaactataagggacaggtcataactcatccagatggggaggacaag
gtggtgccagggctgtatgcctgtggtgaggctgcctgtgccagtgtccatggtgccaac
cggctgggtgccaactccctgctggatctggtggtgtttggccgagcctgtgccctcacc
atcgctgacacctgcactccaggtgagaagctttccccactgaagcccagtgctggagag
gagtctgtggccaacctggacaagatcaggtttgctgacgggaacatcagaacctctgag
atcagactcaacatgcagagaacgatgcagacccatgcagcagtgttccgtaccggtgac
gttctgaaggagggatgtgacaagatggacgccatctaccagaccatggaggacatcaag
acattcgaccgtggtatggtgtggaacactgacctggtcgagtctctggagctgcagaac
ctgatgctgaacgcggtccagactatccactctgccgaggcccgcaaggagaccagggga
gcacatgcccgggaggactacaaggaccgtatggatgagctggactacgccaggcctctg
gcaggacaggagaggaagcctttcgaacagcattggagaaaacacaccatgtccactgtg
gatcctcagactggcgaggtaactctggagtaccgaccagtgattgacacctctctggac
cagggggaatgttcagccgtccctccagccatccgctcctattga

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