Oncorhynchus tshawytscha (Chinook salmon): 112235962
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Entry
112235962 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112235962
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112235962
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112235962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf-RING_16
RINGv
zf-RING-like
zf-RING_4
PHD
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
112235962
NCBI-ProteinID:
XP_024260289
LinkDB
All DBs
Position
LG05:complement(42566484..42652694)
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AA seq
391 aa
AA seq
DB search
MCVSVDWHSSECKMLFSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGN
FDDLPARFGYRLPSDGLKGFLIGARPQNACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIK
VLNAQKAGYKAAIVHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETADSLKKDYAYDKG
GHVVLMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQGRHRARRSRLRKDQLKKLP
IHKYNKGDAYDVCAICLDEYEEGDKLRVLPCSHAYHNKCVDPWLTKTRKTCPVCKQKVVP
SAGDSDSDSEEGDSGPDENEVSESTPLLRSMASTSGHSFGTMSGASRSEPDQESSEYEDD
HLDTSDDSEVTVETVVQLQEPRPDDHDPVRA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcagtcgactggcacagctcggaatgcaagatgctgttctccctggggatg
ctgatgctgtccgccacacagatctacaccatctttaccgtgcagctctttgccttcctc
aacctgctgcccgtcgaggccgacatctctgcctacacatttgacaacaaaacgggaaac
tttgatgacctgcctgcacggtttgggtaccggttgcccagcgatggactcaagggcttt
ctgattggtgcacggccccaaaatgcctgcgaacccattgacccgccccctattcgggac
aacctcactggtgccttcatcgtgctcatcaagcgcttcgactgcaactttgacatcaag
gtccttaacgcccagaaggccgggtacaaggcggcgattgttcacaacgtggactctgat
gacttaatcagcatgggatccaatgatctggatattttgaagcagattgacattccatca
gtgtttgtgagcgaagagactgccgactccctgaaaaaggactacgcatatgacaagggg
ggtcatgtggtcctcatgccggacttcagcctgcctctggaatactacctgatccccttc
ctcatcatcgtgggaatctgcctcatcctcatcgtcgttttcatgatcaccaagtttgtc
cagggcagacacagggctcggagaagccgtctgcgcaaggaccagctgaagaaacttccc
attcacaagtacaataaaggggacgcctacgatgtgtgtgccatatgcctggatgagtac
gaggagggagacaagctccgggtcctgccctgctctcacgcttaccacaacaagtgtgtg
gacccctggctgaccaagaccaggaagacgtgtcctgtgtgcaagcagaaggtggtcccc
tctgcgggcgactcagactccgattcggaggagggcgacagcgggcccgatgagaacgag
gtgtcagagagcaccccgctgctgcgctccatggcctccaccagcggccactcttttggc
accatgtcgggcgcctcacgttccgagcccgatcaggagtcctccgagtatgaagacgac
cacctggacaccagcgacgacagcgaggtcaccgtggagacagtggtgcagctgcaggag
cctcgtcctgacgaccacgacccggtccgcgcctga
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