KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112237130Help
Entry
112237130         CDS       T05605                                 

Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00020  Citrate cycle (TCA cycle)
otw00190  Oxidative phosphorylation
otw01100  Metabolic pathways
otw01200  Carbon metabolism
Module
otw_M00009  Citrate cycle (TCA cycle, Krebs cycle)
otw_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
otw_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    112237130
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    112237130
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     112237130
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 FAD_binding_3 GIDA DAO
Motif
Other DBs
NCBI-GeneID: 112237130
NCBI-ProteinID: XP_024261514
LinkDB All DBs
Position
Unknown
AA seq 461 aa AA seqDB search
MSVSVYPSQYYSDPQISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP
TRSHTVAAQGGINAALGNMEGDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVEVRD
NYVGGRTYFSCTSPPQHGDERLSKEPFFSISRGCGPEKDHVYLQLHHLPHQQLATRLPGI
SETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHPDGEDKVVPGLYACGEAAC
ASVHGANRLGANSLLDLVVFGRACALTIADTCTPGEKLSPLKPSAGEESVANLDKIRFAD
GNIRTSEIRLNMQRTMQTHAAVFRTGDVLKEGCDKMDAIYQTMEDIKTFDRGMVWNTDLV
ESLELQNLMLNAVQTIHSAEARKETRGAHAREDYKDRMDELDYARPLAGQERKPFEQHWR
KHTMSTVDPQTGEVTLEYRPVIDTSLDQGECSAVPPAIRSY
NT seq 1386 nt NT seq  +upstreamnt  +downstreamnt
atgtctgtctctgtgtatccgagtcaatattattctgatcctcagatctcaacccagtac
ccggtagtggatcacgagtttgatgcggtggtggtaggggctgggggagcaggtctgaga
gctgcttttggtctgtctgaggctggcttcaacacggcctgtgtcaccaagctgttcccc
actaggtctcacactgtggcagcacagggtgggatcaatgcagccctgggtaacatggag
ggagatgattggaggtggcacttctacgacacagtgaagggatctgattggctaggggac
caggatgctatccactacatgacagagcaggccccagctgccgtggtggaggtgagagat
aattatgttggtggccgtacctacttcagctgtaccagcccaccccagcacggggatgaa
agactctcaaaggagccttttttttccatttcaaggggttgtggtccagagaaggaccat
gtgtacctgcagttgcaccacctgccccaccagcagctggccacccgcctgcctggtatc
tctgagaccgccatgatcttcgctggggttgacgtcaccaaagagcccatccctgtcctg
cccaccgtccactacaacatgggaggaatccccactaactataagggacaggtcataact
catccagatggggaggacaaggtggtgccagggctgtatgcctgtggtgaggctgcctgt
gccagtgtccatggtgccaaccggctgggtgccaactccctgctggatctggtggtgttt
ggccgagcctgtgccctcaccatcgctgacacctgcactccaggtgagaagctttcccca
ctgaagcccagtgctggagaggagtctgtggccaacctggacaagatcaggtttgctgac
gggaacatcagaacctctgagatcagactcaacatgcagagaacgatgcagacccatgca
gcagtgttccgtaccggtgacgttctgaaggagggatgtgacaagatggacgccatctac
cagaccatggaggacatcaagacattcgaccgtggtatggtgtggaacactgacctggtc
gagtctctggagctgcagaacctgatgctgaacgcggtccagactatccactctgccgag
gcccgcaaggagaccaggggagcacatgcccgggaggactacaaggaccgtatggatgag
ctggactacgccaggcctctggcaggacaggagaggaagcctttcgaacagcattggaga
aaacacaccatgtccactgtggatcctcagactggcgaggtaactctggagtaccgacca
gtgattgacacctctctggaccagggggaatgttcagctgtccctccagccatccgctcc
tattga

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