Oncorhynchus tshawytscha (Chinook salmon): 112237830
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Entry
112237830 CDS
T05605
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112237830 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237830 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112237830 (vps36)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
112237830 (vps36)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112237830 (vps36)
Exosomal proteins of colorectal cancer cells
112237830 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
G1_gp67_C
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
112237830
NCBI-ProteinID:
XP_042167182
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All DBs
Position
LG33:49352177..49379117
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AA seq
356 aa
AA seq
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MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIALLSTHQLIWRDLKNHECCIA
IPLSQIIYFEEQAAGIGKRTPPLSLGYFFRRLTEELSQKRWESTPMSQPIPTATNSQTGR
TRAVGIVGIERKIEERRKETEKNISEAFEDLSKLMVKAKEMVELSRSIANKIKDKQGDIT
EDETIRFKSYLLSMGIANPVTRETHGSGTHYHLQLAKQLGDILLAPLEERGGMMALTEVY
CLVNRARGMELLSPEDLVNACKMFESLKQPLRLRIFDSGVMVVQLQSHSEEEMISSALDN
VTDKGSLTAEEFAKLLGLSVLLSKERLLLAEKMGHLCRDDSVEGLRFYPNLFNSQA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacattggtgattcaa
caacgaggtgtcaaactttatgacggagaagacaaggccaagttggatgttggaattgct
ctgctgagtactcaccagttaatatggagggacctgaagaatcatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagaaca
ccccctctctctcttggctatttcttcaggaggctgaccgaggagttgagccagaagaga
tgggagagtacgcccatgtcacaacccatccctacggcaaccaactcacagacaggaagg
acgcgagcggtggggatcgttggcatcgagaggaagatagaggagaggaggaaagagaca
gagaaaaatatctcagaggcctttgaggacctcagtaagctgatggtgaaggcgaaggag
atggtggagctgtccaggtccatcgccaacaaaatcaaagacaagcagggagacatcaca
gaggatgagactatccggttcaaatcctacctgctcagtatgggtatagccaaccccgtt
accagggagacgcacggctcaggtacccactaccacctacagctggccaagcagctggga
gacattctgctggcaccactagaggagcgtggtgggatgatggctctgactgaagtgtac
tgtctggtcaacagagctaggggaatggagctgctgtctccagaggatttggtgaatgcc
tgtaagatgtttgagtcgctgaagcaaccactgaggttgcgtatctttgacagtggtgtg
atggtggttcagctgcagtcccacagtgaggaggagatgatctcttcggccctggacaac
gtaactgataaaggctctctgacagctgaggagtttgccaagctgctcggtctctctgtt
cttctgtctaaagaaaggttgttactagcagagaagatgggtcacctgtgtagagacgac
tccgtggaaggactacggttctaccccaaccttttcaacagtcaggcttga
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