KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112241349
Entry
112241349         CDS       T05605                                 

Definition
(RefSeq) glucocorticoid receptor-like isoform X1
  KO
K05771  glucocorticoid receptor
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    112241349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:otw03000]
    112241349
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:otw03310]
    112241349
Transcription factors [BR:otw03000]
 Eukaryotic type
  Zinc finger
   Cys4 estrogen receptor-like
    112241349
Nuclear receptors [BR:otw03310]
 3. Estrogen like
  3C. 3-Ketosteroid receptor
   112241349
SSDB
Motif
Pfam: GCR Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 112241349
NCBI-ProteinID: XP_024265230
LinkDB
Position
3
AA seq 808 aa
MDQGGVKKSRSNNDNSRVKLLLGETPSERTPLTGAPCSAMSVALATTTTSFLPSSQLMQP
GDVPSGLSNSPPPSGEDLASASVTASVGLYLEDPEPPTTKLLPQQTNTSLGLGLFTLGDT
YSRLEDSIADFHRSSPSMDSLIGGSDPNLFPMSMRTETDFSRDQDLMDMDQEGYIGKDQK
LFNDNTLDLLQDFELTGSPSDFYVGDDAFLSSLADDTLLGDESQDRGVSNSTSKPAATTT
NSGGFSGSNTTTLNGSNLLTCQDESNSSTPMTGNSPTPNTFPVVKLEKESGFIQLCTPGV
IKQEKTSAIRSYSCRMSGSTGGSTSSSPSELSSASPISICGVSTSGGQSYHFGVNSSINT
PLVSTTSGASQQKDQKPSVFSLYPPLVTVGEAWNNSSYGDGASGMQGLSSPTSSFSSSFA
SSTSRQGGGAASCTTQGKAGTAHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGTVAR
GQHNYLCAGRKDCIIDKIRRKNCPACRFRKCLMAGMNLEARKTKKLNRLKGVQQPTMAEL
TPRPLPEARSLVPKSMPQLTPTMLSLLKAIEPDTIYSGYDGTLPDTSTRIMTTLNRLGGR
QVVSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCDGNMLCFAPDLVI
NQDRMKLPYMADQCEQMLKISSEFVRLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFDEI
RMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMVGGLLNFCFYTFVNKSLSVEF
PEMLAEIISNQLPKFKAGSVKPLLFHQK
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggatcaaggaggagtgaagaagagcaggagtaacaacgacaacagccgagttaagctc
cttctgggcgaaacgccctcagagagaacccctctcactggtgctccctgcagtgccatg
tccgttgctttggcaaccaccaccacctccttccttccatccagccagctgatgcaacca
ggtgacgtgcccagcggactcagtaacagccctcctccctcaggtgaggacctcgcctca
gcctccgtcacggcctccgtgggcctctacctggaagacccagagcctcccaccacaaag
ctcctgccccaacagactaacacgtccctgggccttggactcttcacccttggggatacc
tactcccgcctggaagacagcatcgctgacttccaccgctcctcacccagcatggactct
ctgatcgggggctcggaccctaacctgttccccatgtccatgaggacggagacagacttc
tcccgggaccaggaccttatggatatggaccaggaagggtacattggaaaagaccagaaa
ctgttcaacgacaacactctggatctcctccaggactttgagttgacaggctccccctca
gacttttacgtaggggacgacgccttcctttcctccctggctgatgacactctgctgggg
gatgagagccaggatcgtggggtctccaactccacctccaagccagctgctactacgacc
aatagtggtggttttagcggttccaacaccaccacgttgaatggtagcaatctactaaca
tgtcaggatgaatccaactccagcacccctatgacaggcaactccccgacccccaacacc
tttcccgtggtgaagctcgagaaggaatctggcttcatccagctgtgtactccaggagtg
atcaaacaggagaagacctcggccattcgtagctactcctgccgaatgagtggtagtacc
ggcggctccacttcctcctccccctcagagctgtccagcgccagccccatctccatctgt
ggggtgagcacctctggaggacagagctaccactttggagtcaacagcagcatcaacacc
cccttggtttccactaccagtggagcttcccagcagaaggaccagaagccctcggtgttc
agcctgtatcctccgttggtgaccgtaggagaggcttggaacaacagtagctatggggac
ggagcttctggaatgcaaggtctctccagccctacctcctctttctccagtagctttgca
agttctacttccaggcagggtggtggcgctgcgtcgtgtacaacccagggcaaggccggg
accgcccataagatctgtctggtgtgttcagatgaggcgtccggctgtcactacggggtg
ctcacctgcggaagctgcaaggtgttcttcaagagagccgtggaaggtacggtggcaagg
gggcaacacaactacctgtgtgctgggaggaaggactgcattatcgataagatcagaagg
aagaactgtccagcctgccgcttccgcaagtgtctcatggcagggatgaacctggaagct
cgtaaaaccaagaagctgaaccgtttaaagggggtgcagcagcccaccatggccgagctg
accccccgtccgctcccagaggccaggtcgctggtcccaaagtccatgccccagctcacc
cccaccatgctgtctctactaaaggccatcgagccagacaccatctactctggctacgac
ggcaccctgccagacacctccacacgcatcatgaccaccctcaacaggctggggggacga
caggtggtatcagccgtcaagtgggccaagtctttgccagggttccggaaccttcacctg
gacgaccagatgactctgctgcagtgttcctggttgttcctcatgtccttcggcctgggc
tggaggtcctaccaacagtgtgacgggaacatgctctgcttcgctccagacctcgtcatc
aaccaggaccgtatgaagctgccctacatggcagaccagtgtgaacagatgttgaagatc
tccagtgagtttgtcagactgcaggtgtctcatgacgagtatctgtgtatgaaggttctg
ctgctgctcagcaccgtaccaaaggatggtctgaaaagtcaggcagtgtttgatgagatc
aggatgtcctacatcaaggagttggggaaggccatcgtcaagagggaggaaaactccagc
cagaactggcaacgcttctaccagctcaccaagcttcttgactccatgcacgagatggtt
ggtgggctgctcaacttctgcttctacacgttcgtcaacaagtctctgtcggtggagttc
ccagagatgttagcagagatcatcagcaaccagttaccaaaattcaaagccgggagcgtc
aagcccctcctcttccaccagaaatga

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