Oncorhynchus tshawytscha (Chinook salmon): 112245005
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Entry
112245005 CDS
T05605
Name
(RefSeq) beta-1,4-galactosyltransferase 1 isoform X1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00052
Galactose metabolism
otw00510
N-Glycan biosynthesis
otw00513
Various types of N-glycan biosynthesis
otw00514
Other types of O-glycan biosynthesis
otw00515
Mannose type O-glycan biosynthesis
otw00533
Glycosaminoglycan biosynthesis - keratan sulfate
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Module
otw_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112245005
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112245005
00513 Various types of N-glycan biosynthesis
112245005
00515 Mannose type O-glycan biosynthesis
112245005
00514 Other types of O-glycan biosynthesis
112245005
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112245005
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112245005
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112245005
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112245005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112245005
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
112245005
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
112245005
2.4.1.90 N-acetyllactosamine synthase
112245005
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
112245005
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112245005
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112245005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
112245005
NCBI-ProteinID:
XP_024268704
LinkDB
All DBs
Position
LG11:complement(6935043..6943479)
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AA seq
400 aa
AA seq
DB search
MLDSSLNFRLRRKGWTVVVVLGVINLLVVLFNLMGYSNGLSANKQIKTQTRIETAFITVT
LPPQDNGQHDLNNSVVILRTPKFKDIHLPNTATTTTTNTTSTTTLWNKFEKCSDPSPHLV
GPLKVEFSTPVSLDTVRKENPGLQGGGRYKPQDCAALQKVALIIPFRHRDDHLKFWLYYL
HPILQRQQLDYGVYVINQQSFTLASYRKCKRDERRGNVNDGDDTFNRAKLMNIGYAEALK
EYDYDCFVFSDVDIIPMDDRNPYKCFSQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQF
LEINGFPNNYWGWGGEDDDIFNRLSSRGMSISRPDGEVGKCRMIRHERDKLNDPNPQRFD
RIQRTRLTINTDGISSLKYKVVKVEKDALFTKITVDVGKP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactcatctctcaactttaggctgcggaggaaaggctggaccgtggttgtagtt
ttaggtgttattaatctcttagtggttttatttaatttaatgggttactcgaatgggttg
tcagcaaacaaacaaataaagacacagacgcgaattgaaacagcttttattaccgtgaca
cttccaccgcaagataatggacaacacgaccttaataacagcgttgtaatattgcgaact
ccgaagtttaaggatatacatttacccaatacagctactacaacaactactaacactact
tctactacaactttgtggaataagtttgaaaaatgttctgatccgtctcctcatctggtg
gggcctctcaaggtggagttctctacgcctgtcagcttggacacagtgaggaaggagaac
ccaggtctgcagggaggaggtcgctacaaaccacaagactgcgccgccctccaaaaggtt
gctctaatcatccccttccgccatcgcgacgatcacctcaagttctggctctactacctc
catcccatccttcagcgccaacagctggactacggcgtctacgtcatcaatcagcaatcc
ttcaccctcgcttcctacagaaaatgtaagagggatgaaagaagaggaaacgtaaatgat
ggagacgacacattcaacagggccaagctgatgaacattggctatgctgaggccctgaaa
gagtatgactacgactgctttgtgttcagtgacgtggacatcatccccatggatgaccgc
aacccctacaaatgcttcagccagcccagacacctgtctgtctccatggacaagtttggc
ttcaagttgccctataaccagtactttggcggtgtctcagcgttaagtaaggagcagttc
ctggaaatcaacggctttcccaacaactactggggctggggtggtgaagatgatgacatt
ttcaacaggttgagctccagaggaatgtccatctctcgtccagatggcgaggtcggaaaa
tgccggatgatccgtcacgagagagacaaactgaacgacccaaatcctcagaggtttgac
agaatacaacgcacgagactgacgataaatacagatgggatcagctctctcaagtacaaa
gtcgtcaaagtggaaaaggatgctctgttcacgaaaatcacagtagatgtggggaaacct
tag
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