KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112245005
Entry
112245005         CDS       T05605                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1 isoform X1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00052  Galactose metabolism
otw00510  N-Glycan biosynthesis
otw00513  Various types of N-glycan biosynthesis
otw00514  Other types of O-glycan biosynthesis
otw00515  Mannose type O-glycan biosynthesis
otw00533  Glycosaminoglycan biosynthesis - keratan sulfate
otw00601  Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100  Metabolic pathways
Module
otw_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:otw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    112245005
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    112245005
   00513 Various types of N-glycan biosynthesis
    112245005
   00515 Mannose type O-glycan biosynthesis
    112245005
   00514 Other types of O-glycan biosynthesis
    112245005
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    112245005
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    112245005
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:otw01003]
    112245005
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112245005
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112245005
Enzymes [BR:otw01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     112245005
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     112245005
    2.4.1.90  N-acetyllactosamine synthase
     112245005
Glycosyltransferases [BR:otw01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   112245005
Membrane trafficking [BR:otw04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    112245005
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   112245005
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 112245005
NCBI-ProteinID: XP_024268704
LinkDB
Position
LG11:complement(6935043..6943479)
AA seq 400 aa
MLDSSLNFRLRRKGWTVVVVLGVINLLVVLFNLMGYSNGLSANKQIKTQTRIETAFITVT
LPPQDNGQHDLNNSVVILRTPKFKDIHLPNTATTTTTNTTSTTTLWNKFEKCSDPSPHLV
GPLKVEFSTPVSLDTVRKENPGLQGGGRYKPQDCAALQKVALIIPFRHRDDHLKFWLYYL
HPILQRQQLDYGVYVINQQSFTLASYRKCKRDERRGNVNDGDDTFNRAKLMNIGYAEALK
EYDYDCFVFSDVDIIPMDDRNPYKCFSQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQF
LEINGFPNNYWGWGGEDDDIFNRLSSRGMSISRPDGEVGKCRMIRHERDKLNDPNPQRFD
RIQRTRLTINTDGISSLKYKVVKVEKDALFTKITVDVGKP
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgctcgactcatctctcaactttaggctgcggaggaaaggctggaccgtggttgtagtt
ttaggtgttattaatctcttagtggttttatttaatttaatgggttactcgaatgggttg
tcagcaaacaaacaaataaagacacagacgcgaattgaaacagcttttattaccgtgaca
cttccaccgcaagataatggacaacacgaccttaataacagcgttgtaatattgcgaact
ccgaagtttaaggatatacatttacccaatacagctactacaacaactactaacactact
tctactacaactttgtggaataagtttgaaaaatgttctgatccgtctcctcatctggtg
gggcctctcaaggtggagttctctacgcctgtcagcttggacacagtgaggaaggagaac
ccaggtctgcagggaggaggtcgctacaaaccacaagactgcgccgccctccaaaaggtt
gctctaatcatccccttccgccatcgcgacgatcacctcaagttctggctctactacctc
catcccatccttcagcgccaacagctggactacggcgtctacgtcatcaatcagcaatcc
ttcaccctcgcttcctacagaaaatgtaagagggatgaaagaagaggaaacgtaaatgat
ggagacgacacattcaacagggccaagctgatgaacattggctatgctgaggccctgaaa
gagtatgactacgactgctttgtgttcagtgacgtggacatcatccccatggatgaccgc
aacccctacaaatgcttcagccagcccagacacctgtctgtctccatggacaagtttggc
ttcaagttgccctataaccagtactttggcggtgtctcagcgttaagtaaggagcagttc
ctggaaatcaacggctttcccaacaactactggggctggggtggtgaagatgatgacatt
ttcaacaggttgagctccagaggaatgtccatctctcgtccagatggcgaggtcggaaaa
tgccggatgatccgtcacgagagagacaaactgaacgacccaaatcctcagaggtttgac
agaatacaacgcacgagactgacgataaatacagatgggatcagctctctcaagtacaaa
gtcgtcaaagtggaaaaggatgctctgttcacgaaaatcacagtagatgtggggaaacct
tag

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