Oncorhynchus tshawytscha (Chinook salmon): 112251976
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Entry
112251976 CDS
T05605
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112251976 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
otw03051
]
112251976 (psmd1)
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
112251976 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Nop52
Zip
XRCC4
Cnd1
TASL
PA26
Tim54
NatA_aux_su
SMYLE_N
Motif
Other DBs
NCBI-GeneID:
112251976
NCBI-ProteinID:
XP_024278611
LinkDB
All DBs
Position
LG06:9280540..9334418
Genome browser
AA seq
971 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNSIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFDESLNYALGAGDLFNVTDDTEYVETIIAKCIDHYTKQRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLGDHKYKQAIGIALETRRLDIFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPIADKDSDAMET
DDKASSSPAGKAADSKDEPKDQNAKMIKILSGEMAIEFHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGGL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQTEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVEVQEAEKEKKDEEKEKEKEKEKEKEKKKEPEPNFQLMENPA
RVMPAQLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEP
EAPESFEYVDE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtctgccgctggaatcatctcactgctggatgaggaggagccccaactcaag
gagtttgctctgcacaagctgaactccattgtcaatgacttctgggctgagatatcggga
tctgttgacaaaatcgaggtcctgtatgaagatgagacatttcggagcagggcgtttgct
gccttggtggcttccaaagtgttctaccacctcggggcgtttgatgagtcgttgaactac
gctctgggtgcaggagaccttttcaatgtcacagacgacactgaatatgtggagaccatt
atcgccaaatgcattgatcactacaccaagcagcgggtggagaacgctgagcttcctgag
gacgaggagaagaagagcatcgacccccggttggagggcatcgtcaacaagatgttcctg
cgttgcctgggcgaccataagtacaagcaggccatcggcattgccttggagactcgacgc
ctggacatcttcgagaagactatccttgaatcgaatgacgttagtggcctactggcctac
agcctgaaggtctgcatgtcactaatgcagaacaagaagttccgcaacgaggtcctccga
gtgctggtcaagctctacatgaatctggagaagcctgacttcatcaacgtttgccagtgc
ctgatcttcctggacgacccacaggcggtgagcgacatcctggagaagctggtgaaggaa
gacaacctgctgatggcctaccaaatctgcttcgacctgtacgagagtgccagccagcag
ttcctctcctccgtcatccagaacctgcgcaccgtgggcacgcccatccccgccgtgcct
ggctccaccaacacaggcaccgtgcccatcgcagacaaagacagtgatgctatggagacg
gacgacaaggccagcagctcccctgcaggaaaagctgcagacagtaaggacgagcctaag
gaccagaacgcgaagatgatcaaaattctcagtggagaaatggccatcgaatttcatctg
cagttcctcatccggaacaacaacacagacttaatgattctcaagaacacaaaggatgca
gtccgaaattcagtgtgtcacacagccacggtcatagccaactccttcatgcatacgggg
accacaagtgaccagttcctcagagagaacttggagtggcttgcaagagccaccaactgg
gccaagttcacagccacagccagtcttggcgtcattcacaagggtcacgagaaagaggca
ctgcagttgatggccacttatctgcccaaagacacctcacccggatcagcctaccaggag
ggaggtggcctgtatgccctcgggctaatccacgccaaccacgggggggacatcatcgac
tacctgctcagtcagctcaagaacgccagcaacgacattgttcgtcacgggggaggtctg
ggcctgggattggctgctttgggtacagccaggcaggatgtgtacgatctgctcaagtct
aacctgtaccaggacgatgcagtcacaggcgaggcagcaggactggccctggggctcgtc
atgctgggctccaagtctgctcaggccatcgaggacatggtgggctacgcccaggagact
cagcacgagaagatcctgcgcggcctggccgtgggcatcgccatggtgatgtacggacgc
atggaggaggcagacacgctcatcgagagcctctgcagggacaaggaccccatcctgcgc
cgctccggaatgtacacagtgggcatggcctactgtggctccgggaacaacaaggccatc
agacgcctgctgcatgtggctgtaagcgacgtgaacgatgatgtcagaagggcagcggtg
gagtccattggattcatcatgttcaggaccccagagcaatgccccagtgtggtgtctctc
ctgtcagagagctacaacccccatgtgcgctgcggagccgccatggccttgggcatctgc
tgtgccgggacaggcaacaaggaggccatcaacctgctggaacctatgaccaacgaccca
gtgaactacgtgagacagggtgccctcatctcctctgccctcatcatgatccagcagacc
gaggtcacctgtcccaaggtgaaccagttccggcagctctactccaaggtcatcaacgac
aagcacgatgacgtcatggccaagttcggggccatcctggcccagggcatcctggatgca
ggtggtcgtaacgtcaccatctccctgcagtcgaggacgggccacacccacatgccgtca
gtggtgggcctgcttgtgttcacccagttctggttctggttccccctctcccacttcctc
tccctggccttcacccccaccgccatcatcggactcaacaaggacctcaagatgcccaag
gtgcagtaccgctctaactgcaagccttccaccttcgcctaccctccggccctggaggta
cccaaggagaaagagaaggagaaggtgtctactgctgttctctccatcacagccaaagct
aagaagaaggagaaagagaaggagaagaaggagaaagaggaggagaagatggaagtagag
gtacaggaggctgagaaggaaaagaaagatgaggagaaagagaaggagaaggagaaagag
aaggagaaggagaagaagaaagaacccgagcccaacttccagctgatggagaacccagcc
agagtgatgcccgcccagctcaaagtgctcaacatgcccgagacgtgccgctaccagccc
ttcaaaccgctgcacaccggcggcattatcatcatgaaggacaccagcgaggaagaggag
gagctggtggagcctgtctctgcccacggccccaagatcgaggaggaggaacaggagccc
gaggcccccgagtccttcgagtacgttgacgaatga
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