Oncorhynchus tshawytscha (Chinook salmon): 112252832
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Entry
112252832 CDS
T05605
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04114
Oocyte meiosis
otw04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
112252832
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
112252832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252832
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112252832
Factors involved in mRNA localization
Trans-acting binding proteins
112252832
mRNA cycle factors
P-body specific factors
112252832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-B_box
zf-U1
Motif
Other DBs
NCBI-GeneID:
112252832
NCBI-ProteinID:
XP_024280247
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All DBs
Position
LG06:61685814..61762783
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AA seq
661 aa
AA seq
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MVNIGVLHLSLPHTSEWIAGVRKAQQTMQDDLLMDKNKAQPNQQLDPAVDPPSTPTPSDP
PTLDESPSSVSNQAASALNKEKVPMESPILPGLSFHQPQETGGTLSPSYGSTWSTGTTNT
VDDNFNQGIPSVNGTMLFQNFPHHINPVFGGNFSPQLGLAQSQHPQQQAQHQPAQQRRSP
VSPNHGPFPQRNAYSHQSVMNSKASSPASSSGWNNHQNATWSTGSNPWSGLQAGRDPRRA
VGVGVGVGVGVGVPSSMNPISPMKKPYSSNVIAPPKFPRAGLLTQKSWMEDNALRMDNSN
NMLPFQDRNRPFDAFSLHSLENSLMDMIRTDHDKGRMGLNFHHPGAEHITPLNTRSYGRR
RGRSSLFPFEDGFLDDGHGDPSLTPGLNSPTRCQNEERMERYSRKVFVGGLPPDIDEDEI
TNSFRRYGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQALIDACIEDDGKLYLCVSS
PTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVC
YAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCD
ECQGARCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRQVSFRW
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatatcggtgtcctccacctgtctctcccgcacacatccgagtggatcgctggc
gtcagaaaggctcagcaaaccatgcaggatgatttactgatggacaaaaacaaagcccaa
cctaatcagcagctagatccagcagtagaccctccctccaccccgaccccttcggatccc
cctacattagatgagagcccgtcgagtgtgagcaaccaagcagcttcagctctcaacaaa
gagaaagtgccgatggagtctccgatcctgccaggcttgagttttcatcagccgcaggaa
accggtggcaccctgtccccctcatatggtagcacttggtctactggaactacgaacacc
gtggacgacaattttaatcaaggaataccctcggtgaacggaacaatgcttttccagaac
ttcccccaccacataaatccggtatttggaggcaatttctcacctcagcttggcttggca
cagtctcagcatccacagcagcaagcccagcaccagccagcgcagcaacggagatcccct
gttagccccaaccacggtccttttccacagagaaacgcttacagtcaccagtctgtcatg
aatagcaaggcttcttcacctgcctcatcttcgggttggaataatcaccaaaatgccact
tggagcacaggctccaatccatggagcggtctccaggcaggcagggacccgcgaagagct
gtgggagtcggggtcggtgtgggggtcggtgtaggggtgccttcttccatgaaccccatc
tccccgatgaaaaagccctattctagcaacgttatagcacccccaaaattcccgagagct
ggtctcctcacccagaaatcttggatggaggacaacgccttaaggatggacaacagcaac
aatatgctgccttttcaggaccggaatcggccctttgatgcatttagcttgcactctttg
gagaattccttaatggatatgataaggactgatcatgacaaaggacgcatgggtctgaac
ttccaccaccctggagcagagcacattacgccattaaacaccaggagctatggccgcaga
agaggtcgctcttcgctatttccctttgaggatggtttcctggacgacggtcacggtgac
ccctctctgaccccggggttgaactcgcccacgcgctgtcagaacgaagagcggatggag
cgctactccaggaaggtgtttgttggaggcctgccccctgacatagatgaagatgagatc
accaacagcttccgtcgctatggacacctggttgtggattggccccacaaagccgagagc
aagtcctactttccgcctaaaggctatgccttcctgctgttccaagaggagacctctgtc
caggccctgattgatgcctgcattgaggacgatggcaagctttacctgtgtgtctccagc
ccaactatcaaggacaagccagtccagatccgcccctggaacctaagtgacagtgacttt
gtgatggacggctcccagccgctggacccccgaaagaccatctttgtggggggcgtgccc
cggcctttacgtgcagtggaactagctatgatcatggacaggctgtatggcggcgtgtgc
tatgccggcatcgacactgaccctgagctcaagtaccccaagggggcgggccgagtggcc
ttctccaatcagcagagctacatcgctgccatcagcgcccgattcgttcaactgcagcac
aatgacattgacaaacgggttgaggtgaagccctacgtcctggacgaccagatgtgtgac
gagtgccagggggcgcgttgtggggggaagtttgcccccttcttctgtgcgaacgtcacc
tgcctgcagtactactgcgagtactgctgggccagtatccactcccgggcgggccgagag
ttccacaagccactggtgaaggaggggggcgaccgccctcgacaagtgtccttccgctgg
agctga
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