Oncorhynchus tshawytscha (Chinook salmon): 112254371
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Entry
112254371 CDS
T05605
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112254371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112254371
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112254371
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
112254371
NCBI-ProteinID:
XP_024282654
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All DBs
Position
LG07:complement(32059808..32072945)
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AA seq
448 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQNSVAQLRATDSTPAIYVTLPPIAARQPPAQVPV
EVLKVQSHLENPTKYHIQQSQRQQVKEYLSTTLGNKVAPQILGVSPLPLSSSAPEMTPTA
LSAPNSPMALLNLGSKKEEIDGVIDDIISLESSFNDDFMTLIDLGLQLPSTLPGNLLDVY
HSPGMAAPTLTVSNSCPADLTNIKREYSDTKALVKERQKKDNHNLIERRRRFNINDRITE
LGAIIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRAKEVEMRQKKLEHANHSLMLRIQ
ELEIQAQLHGLSSPMSHGLSSDPSLLQQQHLQQGDHKLGPSAGEACSQTFLSLGAAAMAQ
PVLTSSPPSSDSPVVVTISSPLDLGSVSFTELDDPSNAGLYLDVGLGDIIMDEGYTLSPE
RVDPLFFVSPGASKTSSRGSSFSMEEDL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtgtgctgcttcggcagcagctgatgcgggaacaagcccaggaacaagag
agacgggaggcccagcagcagaactctgtggctcagctcagggcaactgactccacccct
gccatctatgtcactctgcccccaatagctgctcgccagcctcccgcacaggtgcccgtg
gaggtgttgaaggtgcagagccatctggagaaccccaccaagtatcacatccagcagtct
cagaggcagcaggtgaaggagtatctctccaccaccctcggcaataaggtggcacctcaa
atcctaggtgtatctcccttgccactgtctagctctgcccctgagatgactcccacggcc
ctcagtgctccaaacagcccaatggctttactcaatctgggatccaagaaagaggagata
gatggcgtaattgatgacatcatcagccttgaatcaagtttcaatgatgacttcatgacg
ttaattgacttgggtctacagctgcctagtacactccctggaaacctcctggatgtatac
catagtcctggaatggcagcacctaccctcactgtcagcaactcctgccctgcggatctg
accaatattaaaagggaatactctgataccaaagcgctggtgaaagagagacagaagaag
gacaaccataacctcattgagaggaggcggaggtttaacatcaatgaccgcataacggag
cttggggccataatacccaagtcaagtgacccggagatgcgctggaataagggcaccatt
ctgaaggcctcggtggactacatcaggaagctgcagaaggagcagcagagagccaaggag
gtagagatgcgtcagaagaagctggaacatgctaaccacagcttgatgctgcgtatccag
gagttggagatacaggctcagctccatggcctctccagtccgatgtcccatggcctgagt
tcagacccctccctccttcagcagcagcaccttcagcagggagaccataaactggggccc
agcgctggagaggcctgctcccaaacctttctcagcctgggggcagcagccatggcacag
cctgtccttacctcctccccaccttcctctgactcccctgtggttgtgaccataagcagc
cccctggacctgggcagtgtaagcttcaccgagctggatgacccctccaatgctgggctg
tacctagacgtggggctgggggacatcatcatggacgaggggtacacactgtccccagag
agggtggacccactgttttttgtgtcaccaggtgcctcaaagaccagcagtcgtgggagc
agcttcagtatggaggaggacttgtag
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