Oncorhynchus tshawytscha (Chinook salmon): 112255132
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Entry
112255132 CDS
T05605
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112255132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112255132
03036 Chromosome and associated proteins [BR:
otw03036
]
112255132
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112255132
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112255132
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
112255132
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112255132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C1_4
zf_PR_Knuckle
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112255132
NCBI-ProteinID:
XP_042175437
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MWTDWDSHKMGRQPHLDELTGEREGEARESRNETEQKREKERARESRNETEQKREKERAR
ESRNETEKERAREEEKLELLNEERDGEKERASKGGMESEWESGREEESEGKMEWTSGGQE
ESGSEGESTPSSFHRDPVCVSEQMKRAWLKQVNLCSRARVRVGYTEEEELRDEDYLVCEE
CKSFFIEECELHGPPLFIPDTPAPLGAPDRARLTLPLGLEVRTSAIPGAGLGVFNHGHSV
TQGTHYGPYEGELTNTELAMESGYSWVIYKSKQSDEYIDAKRDTHSNWMRYVNCARNEEE
QNLVAFQYRGGILYRCCKPIAVGEELLVWYGEEYARDLGIGFDFLWDRKSSARGVNESSQ
SQIFSCSGCPFSFTAQIYLYKHTKRCHREEYVRLPRSGGIRSETLAPPSGSQWCSTTPDH
TPITLLTLKHRDTGKPRPHHCSQCEKSFHRSGDLNVHQRTHTGERPYHCSQCGKRFSVSG
NLKTHQRIHTGERPYHCSQCEKSFHRSVDLNVHQRTHTGERPYHCSQCGKGFSVSGNLKT
HQRIHTREAVSLFSVGRVSIDQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtggactgactgggacagtcacaaaatgggaagacaacctcacctggatgagctgact
ggcgagagagaaggagaggcgagagagagtaggaacgagacggagcagaagagagagaag
gaaagagcgagagagagtaggaacgagacggagcagaagagagagaaggaaagagcgaga
gagagtaggaacgagacggagaaggaaagagcgagagaagaggagaaactggagctactg
aacgaagagagagacggagaaaaggagagagcgagcaaaggggggatggaatcagagtgg
gagagtgggagagaggaggagagcgaaggaaagatggagtggacgagtgggggacaggag
gagagcgggagtgaaggagagagcacacccagcagctttcacagggacccagtgtgtgtg
tcagagcagatgaagagggcgtggctaaagcaggtgaacctctgcagcagagccagagtc
agagtcggctatactgaggaagaggagctgagagacgaagattacctcgtctgtgaggag
tgcaagtctttcttcatcgaggagtgtgagctccacggtccccccctcttcatcccagac
acccctgcccccctgggggccccagacagggccagactcaccctgccgctcggcctggag
gtcaggacatcagccatccctggagctgggctgggggtcttcaaccacggacacagcgtg
acccaagggacgcactacggaccgtatgaaggagaactcacaaacacggagctggccatg
gagagtggatactcctgggtgatctacaaaagcaagcagagtgacgagtacattgatgcc
aagagagacactcactccaactggatgaggtatgtgaactgtgcccgcaatgaggaagag
cagaatctggtggctttccagtacagaggagggattctgtaccgctgctgtaagcctata
gctgttggagaggagctgttggtttggtacggagaggagtacgccagagacctgggcatc
ggcttcgacttcctctgggacagaaagagctccgctagaggtgtgaatgagtcgtcccag
tctcagatcttttcctgctctggttgtccgttctccttcacggctcagatctacctctac
aagcacacaaagagatgccacagggaagagtacgtcaggctgccgaggagtggagggatt
agatcagagacactagcaccacccagtggctctcagtggtgttcaacaactccagatcac
accccaatcacactcctcaccctgaaacacagagacacagggaagccaagacctcatcac
tgctctcagtgtgagaagagtttccatcgatcaggagacttaaatgtgcaccaacgtact
cacacaggagaaaggccatatcactgttcccagtgtgggaagaggttcagtgtgtcagga
aatttaaagacacaccagcgtattcacacaggagagaggccgtatcactgctctcagtgt
gagaagagtttccatcgatcagtagacttaaatgtgcaccaacgtactcacacaggagaa
aggccatatcactgttcccagtgtgggaaggggttcagtgtgtcaggaaatttaaagaca
caccagcgtattcacacgagagaggccgtatcactgttcagtgtaggaagagtttccatc
gatcagtag
DBGET
integrated database retrieval system
