Oncorhynchus tshawytscha (Chinook salmon): 112256330
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Entry
112256330 CDS
T05605
Gene name
egf
Definition
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04012
ErbB signaling pathway
otw04020
Calcium signaling pathway
otw04068
FoxO signaling pathway
otw04510
Focal adhesion
otw04540
Gap junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112256330 (egf)
04012 ErbB signaling pathway
112256330 (egf)
04068 FoxO signaling pathway
112256330 (egf)
04020 Calcium signaling pathway
112256330 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112256330 (egf)
04540 Gap junction
112256330 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112256330 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and growth factors [BR:
otw04052
]
112256330 (egf)
Cytokines and growth factors [BR:
otw04052
]
Growth factors
Growth factors (RTK binding)
112256330 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
EGF
EGF_3
DUF5050
EGF_MSP1_1
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
112256330
NCBI-ProteinID:
XP_024285270
LinkDB
All DBs
Position
8
AA seq
1048 aa
AA seq
DB search
MDLDGGNQKRVVTGVGNSILLDFHYTEGRVYWADKKTGVIYKAAMDGTQRQKLHSSEKGI
SGLAVDWVHNFVIWTSGEVGSIKRVDTDGKNERTLLRHLSQPISIAVAPNDRFIFWLSDG
ITPSIQRSDVAGEMITTVLKIPERLGGLSVDRMDKRLFWVQFSLEGESAIGSCDYNGNVV
NVIDQPLLSQSLGMSVFLEQVFYTDMSSRTIRQVNKYSGVEAENINLKRMTHPPTAVKVV
HPLNQPIEDSMPVFPVCDGRTGVCVNVCSNPADQGICQCTKGFALSKHGNYCEDVNECGL
WDHGCSLGCENIPGSYFCTCPKGYALLPDRKTCHETSPCLANMTQCDNGCIATGEGTICV
CLEGSLLQPDGQTCRGCTSSDRGGCSQQCSPITPGRWECDCLPGYKLHQDGKRCTATGPP
PYLLFANIVNIRRVNLDGTGDQSLVEEPSGTVIALDYDPVQNKVYFASTVLKQIERADLD
GGSREVLLTEELDSPEGLAVDWVNRKLYWTDRGLSTIDRSTLDGFDRETIISKGIQKPRG
IAVHPLAKKLFWTDMGTRPVLESASLEGSDRAVIASADLVSPSGLTIDFTEDRLYWCDSK
RGVLETASLDGSNRQVLTENEVGQPFDLAVFEDRLWITDREQQLLLSVDKWTGMDPERLH
GNMVQPASIVVVHPLAKPGANVCLYRNGGCAQVCESRLGFAHCSCHSHIAQSADGKGCLP
SYRSTGDMNSNSGDGESADPFSLKNKTLNDESMPLPPTLFIETMVSDQDDCFSLRCDVNA
QCLLDGGNPTCHCLEGFTGDGELCLDLDECMLGMALCSIQSSVCVNTAGGYYCQCRPGFS
GEEHHCTDFDECKMGTHKCDERAECINTIGKYRCKCQAGYSGNGHTCQELSTTSSWVTTS
RPMDVTSQWLNTNTVESCPSSHDTYCLYEGVCLYFPEMESYACNCISGYMGERCQFSDLE
WWELQQAEQEKRRNVAIALGMVVLITLLSIAACVTYCYGSRRFVRKHPSVDDMSETSTSD
DTMSETTVPKTPRVSLNPVNGDFRTEKQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgatggagggaatcaaaaaagggttgtgaccggtgttggaaactctatccta
ctggacttccactacacagaggggagagtttactgggccgataaaaagacaggggtcatc
tacaaagcagcgatggatggaacacagagacagaagctgcactcgtctgagaaagggatc
tcaggccttgcggtcgactgggttcacaattttgtcatttggaccagtggagaagtggga
agtatcaaaagagtggatacagatgggaaaaatgagaggactcttctaagacatttatcg
cagccaatctccatagcagttgcaccaaatgacagatttatattctggctgtctgatgga
atcacacccagtattcagaggtcggatgtagcgggagagatgattactacagtgctgaag
attccggagagactgggagggctgtcggtcgaccggatggacaagagactgttctgggtc
cagttcagtctggaaggagaaagtgccattgggtcgtgtgactacaacgggaatgttgtc
aatgtcattgaccagccactactgtctcagtctttggggatgtctgtgttcctggagcaa
gtcttctacactgatatgagttcacggaccatacggcaagtcaataagtactcaggggtt
gaggcagaaaacatcaacctaaagcgaatgacacacccccctactgctgtcaaggtggta
catcccctcaaccagccaattgaagactccatgcctgtctttccagtgtgtgatggtcgt
acaggagtgtgtgtgaatgtgtgctccaacccagctgaccaggggatctgccagtgcact
aaaggctttgcccttagcaaacatgggaactactgtgaagatgtcaatgagtgtggcctg
tgggaccacggctgttccctgggctgtgagaacattccaggctcctacttctgcacctgc
cccaagggttacgctctgcttcctgataggaaaacctgccacgagacctcaccatgtctg
gccaatatgacccagtgcgataatggatgtattgctactggtgaggggaccatctgtgtg
tgtctagaggggtccctactacagccggatggacagacctgcagaggctgcacctcttcc
gaccgagggggctgtagtcagcaatgttcccccatcactcctggtaggtgggagtgtgac
tgtctgcctgggtacaagctccaccaagacggtaaacgctgcacagccactggaccccca
ccttatctgctgtttgccaacatagtaaacatcagacgtgttaatctggatgggactggt
gaccaaagccttgtggaggagccgagcggaacagtaatagctctggactatgatcccgta
caaaacaaagtgtactttgccagtacagtactgaaacagattgagcgtgctgatttggac
ggcgggtccagggaggttttgctcactgaggagttggactcaccagagggcctggctgtg
gactgggtcaaccgcaagctctactggactgaccgaggcctctcaactattgaccgcagc
accttggatggcttcgacagagagaccattattagcaaaggcatacagaaaccaagggga
attgcagttcatcctttagccaagaagttgttctggaccgatatgggtaccaggcctgtg
ttggagagtgcgtctttggaaggaagtgatcgtgcggtcatcgcaagcgccgacttggtg
tctcctagtggtctgaccattgacttcactgaagacaggctgtactggtgtgacagcaag
aggggcgtactggagacggcatccctggatggctccaaccgacaagtcttgacagagaac
gaagtaggtcaaccttttgacctggcagtgtttgaggacaggttgtggatcacggacagg
gagcagcagctgctcctgagcgttgacaaatggacggggatggacccagagcgtctccat
ggcaacatggtccaaccagcatccatagttgtggttcaccccctcgccaagccaggagca
aatgtttgtctctatcgaaatgggggctgtgctcaggtgtgtgagagcaggctaggattc
gcccactgctcctgtcactcacacattgcccaatcagctgatggcaaaggctgcttgcca
tcctacagatcaacaggtgatatgaactccaattctggagatggtgagtctgcagacccg
ttctctctgaaaaacaaaactttgaacgatgagagcatgcctctccctcccacactcttc
attgagacgatggtgtcagaccaggatgactgcttctctctccgctgtgatgtgaatgcg
caatgtctactggatggaggcaaccccacctgccactgcctggaaggtttcactggggat
ggagagctgtgtttggaccttgatgagtgcatgttggggatggccctgtgtagtatccag
agctcagtgtgtgtcaacactgctggtggatattactgccagtgtcgccctggcttcagt
ggagaggagcaccactgtaccgattttgacgagtgtaaaatgggaacacacaaatgtgat
gagcgagcggaatgcatcaatactatagggaagtaccgctgcaagtgtcaagctggctac
agtggtaatggacacacatgccaagagttgtcaactacgtcctcgtgggtgaccaccagt
aggcctatggacgtcaccagccaatggctgaacactaacacagtggagagctgcccctca
tctcatgacacttactgtctctacgagggagtctgcttgtacttcccagagatggagtcc
tatgcctgcaactgtatctcgggctacatgggagagcgctgtcagttcagtgatctggag
tggtgggagctacagcaggccgaacaagagaagagaaggaacgtggccatcgccctgggc
atggtggtcctcatcaccctgctctccattgctgcctgcgtcacctactgctacgggtcc
aggagatttgttcggaaacacccctcggtggatgacatgagcgagacaagcaccagtgat
gacaccatgtcagagaccaccgtccccaagacgccacgggtaagtctgaacccagttaat
ggtgacttccgtacagaaaaacaatga
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