Oncorhynchus tshawytscha (Chinook salmon): 112256372
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Entry
112256372 CDS
T05605
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03420
Nucleotide excision repair
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112256372
09124 Replication and repair
03420 Nucleotide excision repair
112256372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112256372
03400 DNA repair and recombination proteins [BR:
otw03400
]
112256372
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112256372
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
112256372
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112256372
TCR (transcription coupled repair) factors
Cul4-CSA complex
112256372
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112256372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
Motif
Other DBs
NCBI-GeneID:
112256372
NCBI-ProteinID:
XP_024285348
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All DBs
Position
LG08:complement(49569669..49585754)
Genome browser
AA seq
857 aa
AA seq
DB search
MESLVEGLPSPNPPPPTQEARPAASDVNTDSSSITNSKKRKINRSEREDIDSISSSPKTH
NSSSSSTSQQIQKKLRFEDSVDFIGLDVKMAEESSSASCSSNKTKTVFLAGVVGHHANGL
TKTAGSTTFSSSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNSTSIKYNL
EELYQAVENLCSHKISARLYKQLRVVCEDHIKAQIDQFREDVLDSTLFLKKIDNCWQDHC
RQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDMKVQSKTIYGILLLIERE
RSGETIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPDYLHHV
NKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTSTLQKGLNHLLDENRIQDLCLLY
QLFSRVRGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFIKN
EKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFI
YGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKD
IMVQFKQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFYLGKHSGRK
LQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIVSIEKDG
ELRRTLQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQA
STTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDR
DYMERDKENPNQYNYVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcttgtagaaggtttaccttcccctaatcccccaccgccaacccaagaggct
agaccagcagcttcagatgtaaataccgacagcagtagtatcacgaattcgaagaagagg
aaaataaaccgttcggagagggaagacattgattcaatatcgtcatctcctaaaacccac
aattcctcttcgtcctccacttcgcaacaaatccagaagaagttgaggttcgaagattcc
gtagacttcataggactggatgtgaaaatggctgaggagtcgtcatctgcatcgtgttct
tcaaacaaaaccaaaacagtttttttggctggggttgttgggcatcatgcaaacgggctg
acgaaaactgcaggctccactaccttctccagcagcaaacctggagctgcaaagaaacta
gtcatcaagaactttaaagaaaagcccaaattgcctgagaactacacacacgagacctgg
caaaaactaaaggaggcagtcgaggccattcaaaacagcacttcaatcaagtacaatctt
gaggaactctaccaggctgtcgagaacctctgctcccataagatatctgccaggctctac
aaacagctacgggtggtttgtgaagaccacatcaaggcacaaatcgatcaattcagagag
gatgtactggacagtaccctcttcctgaagaaaatagacaactgttggcaagatcactgc
agacaaatgatcatgattagaagtatatttttgttcttggaccgcacctatgttttacaa
aactcaatgctcccatcaatctgggacatgggcctagagttgtttaggttttacataatc
agcgacatgaaggtccagagcaagaccatctacggcatcctgctgctcattgagagggag
cgcagtggcgagaccatcgaccgcagcctgctccggagcctactgagcatgctctctgac
ctacagatttatcaggactcctttgagcagcgctttctggaggagactaatcgtctgtat
gctgctgagggacagcgactgatgcaggagagagaggtcccagactatctccatcacgtc
aacaaacgcttagaggaggaagcggacagagtcatcacgtatctagaccagagcacacaa
aaacctctcattgccactgtggagaagcaactactgggtgaacatctcacttcaactctg
cagaaaggcttgaatcacctgctagatgagaacagaatccaggacttgtgtcttctctat
cagcttttcagtcgtgtgagagggggcgtactggttctcttacagcattggatcgagtac
atcaaggcatttggaagtacgatcgtcattaaccctgagaaggacaagaccatggtacag
gagctcctggacttcaaggacaaggtggaccacatcatcgacatctgcttcataaagaac
gagaagtttgtcaatgccatgaaggaggcttttgagaccttcatcaacaagagaccaaac
aaacctgctgagctcatagcaaaacacgtggattcaaagcttagggcgggtaacaaggag
gcgacggacgaggagctggagaagatgttggacaagatcatgatcatcttccgattcatt
tatggcaaagatgtttttgaggccttctacaagaaagatctggccaagaggttgctggtg
ggaaagagtgcctctgtggatgccgagaagtccatgctgtcgaaactgaaacatgaatgt
ggagcagcattcaccagcaagctggaaggcatgttcaaggacatggagctttccaaggac
atcatggtgcagttcaaacagtgtcaaaacatccctggtaacattgagctgacggtgaac
atcctcaccatgggatactggcccacctacatcccaatggaggtccatctgcccgcagag
atggtgcgactgcaggagattttcaagacgttttacctgggcaagcacagcggcaggaag
ctacagtggcagtcgacgttaggccattgtgttttaaaagctgaatttaaagagggcaaa
aaagagcttcaggtttccctgtttcagacgctagtgctgctcatgttcaacgaaggagag
gaattcaccttggaggagatcaagctagctacaggaatagtgtcaatagaaaaggacggc
gagctgcgacggaccctgcagtcgttggcatgtggcaaggcacgggtcatccacaaagtc
cccaagagcaaagacgtggaggacggagacaagttctcctgcaacgatgacttcaaacac
aaactcttcaggatcaagatcaaccagatccagatgaaagaaacggtggaagagcaagcc
agcaccacggaacgagtctaccaggaccggcagtatcagatcgacgccgccatcgtccgg
atcatgaagatgaggaaaactctgagccataatctcttggtgtcagaagtgtacaaccaa
ctcaagttccccgtaaagcctgctgacctaaagaagagaatagagtctctcattgacaga
gattacatggagcgcgacaaggagaaccccaaccaatacaactatgtggcttaa
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integrated database retrieval system
