Oncorhynchus tshawytscha (Chinook salmon): 112257727
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Entry
112257727 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 35 isoform X1
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112257727
09142 Cell motility
04810 Regulation of actin cytoskeleton
112257727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257727
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112257727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
Ras
Cdh1_DBD_1
FF
Motif
Other DBs
NCBI-GeneID:
112257727
NCBI-ProteinID:
XP_024287283
LinkDB
All DBs
Position
LG09:complement(28962282..28979618)
Genome browser
AA seq
1544 aa
AA seq
DB search
MMAKKQDAKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTS
DFGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKRAA
STKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKIQADGFMLCMDVSRGMNRNFDDQLKFV
TNLYGHLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLAFI
ALVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRMHS
SSEFKEYVFLEGTAKCKKLFQQHVYRLKQEHIERRRKIYLSTLPLALSSLVPDLDEIDQL
SWSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETAPAEYIFNAHLE
HLRNECKRAEMRQEFKHKLACSPFVTPGKPWEEARSFIMNEDFYQWLEESEYLDLYNRHQ
KEIIDHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKTLQKLPAERD
ALVLKHIHFVYHPTKETCPSSPQCGDFKIEQLLASRFPTCYPFFNVKSHFGDIKADRINL
VILGKDGLAREFANEIRTLCTNDDRYVLDGKMYELTLRPIEGNVRLPVNSFHTPTFTPHG
CLCLYNSKESLTYVVESIERLRESTIGRRDSHIAQLLTSLLLVTKRGVGTYADIGGETAL
GLIKQGQQVARRLQCSFLDPASPGVGYGHNVNDSQINQVLRGLLDSRRSSSFSSSSPPLP
PKPPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVILEQ
TVGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEIQDIIPVQ
LLAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRIEMFQHFLM
EVVEKRNIVEATHMYDNVAEACTNDTAYSPRCSSPSPGNMFLDSDVDDVEPSPPYFDGTL
TSHGGGFNLPDLDSSDVSVISDISSFENKLNSKVPPQVRPKPTVTFDFRKVGRNPYNTDT
MGHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRPSNEEIIYSVPHDSTQGKIITIR
NANRMHSNGNGSDSEADSSSLERCRKFSAAGVKPRLYRDRSKRLGKFSSFRTSFIGSDDE
MGALPKTKEDEFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRPSIPKPLESNYF
GVPLINVVFPDRPIPLFIDKCVHFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGLDL
VEKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKINDREQRLYTMKDVLRKFPRE
NYDVFRFVMSHLHKVSQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIET
FIHQCAFFFYNQPLLDSPTGLAGLPASPTTTLTGGSTYSCYRSSPPPPPRNSAPCSSRPH
HPPVTPAVPPPPPPTPPLRPHRARDTVKDTVKDTEKGAHAVPLI
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaaaaagcaggatgcgaagtcacccacatacaaccttattgttgtgggtttg
tcagggacggagaaagagaagggccagtgtggagtgggtaagtcctgcctgtgcaaccgc
tttgtgcgccccagtgctgatgacttctatctggaccacacgtcagtgctgagcaccagc
gactttgggggcagagtggttaacaatgaccacttcctgttctggggggaggtggggcgg
gtggtggaggaggggccggagtgcaggatgcatgtggtggagcagaccgagttcattgat
gaccagacattccagccacaccgcagcactgccatgcaaccctacatcaagagggcggcc
tccaccaagctggcctctgcagagaagctgatgtacttctgcacggaccagctggggctg
gagcaggactttgagcagaagcagatgcctgagggcaagatacaggctgacgggttcatg
ctctgtatggatgtcagtagggggatgaaccgcaactttgacgaccagttgaagtttgtc
acaaacctttacggtcatctgagcaaaacaaagaagcccattgtgctcgtcttaaccaag
tgtgatgagggggttgaacgctacatcaaagattctcacacctttgccatcactaaaaag
agtcttccagtagtggagacatctgcacgctctaacatcaatgttgacctagccttcatt
gctttggtgcaactcattgataagagcaggggcaagcccaagatcattccttactttgaa
gccctcaagctccagagtcagcagatagccctggctaaagaccgatacgaatggctagtc
aaccgcatagtgaagaaccacaacgagacctggcttaacaccagccgacgcatgcacagc
tcctcagagttcaaggaatacgtctttctagagggtacagcgaaatgcaagaagctcttc
cagcagcatgtgtaccgcctgaaacaggagcacattgagagacgtcggaaaatctatctg
agcactcttcctctagcacttagctccctggtgcctgacctggatgagatcgaccagctg
agctggtctggggttcagaaggtcctggagtccaagcagcactttgcccattggtttgtg
gttttggaggactctccatgggaggacacgtctcacatagataacatggaggatgagcgc
atcccgtcagacctgttggagacggccccagccgagtacattttcaacgcccacctggag
cacctgaggaatgagtgcaagcgggccgagatgaggcaggagttcaagcacaagctggcc
tgttctccctttgtcacgccaggcaagccctgggaagaggcccgcagcttcatcatgaac
gaagacttctaccaatggttggaggaatcagagtacctggacctctacaaccgccaccag
aaagagataatagaccacgctaaagaggacttccaggagctgctgctggagtattctgag
ctcttctatgagctggaggtggatgccaagcccagcaaggagaagatgggggccatccag
gaggttctaggggaggaacagaggttcaagactctgcagaagcttccagctgagagagat
gctctggtgttgaagcatatccactttgtctaccacccaaccaaggagacctgtcccagc
agcccacagtgtggagacttcaagatagagcagctcctggcctcacgtttcccaacatgc
tacccattcttcaatgtgaagtcccattttggggatattaaagctgaccgaatcaacctt
gtgatattgggcaaagacggactggccagggagtttgccaatgagatcaggactctgtgt
accaatgacgaccggtatgtgctggatgggaaaatgtatgagctgaccctgcgacctatc
gagggaaacgtacgacttcctgtaaattcctttcacactcccactttcacaccccatgga
tgcctgtgtctgtacaactcaaaagagtccctaacttacgtcgtagaaagcattgaaagg
ttgcgggagtcaactataggtagaagggatagccatatagctcagcttttaacatctctg
ctcttggttactaaaaggggagtagggacatatgcagatattgggggagaaactgcctta
ggcctaataaaacagggacagcaggtagcaaggagactgcagtgtagcttcctagaccca
gcctctcctggtgtgggctatgggcacaatgtgaatgacagtcagatcaatcaagtattg
aggggtctcctggactctaggaggagctcatcttttagtagcagctccccacctctgccc
cctaaacctccaggcccaagagactctcctcaccagcccagcccagaggcagacatccgc
atcgtcatgtgcttgatgtgtggagacaattacgacgtggaacagctcctctctcccttc
ctactgcctcagcactgcaggccaacatccaatagtgggacctcagtgatactggagcag
acagtggggcctcacaaacaggtgattgagctctcccttctttcctaccacgcctccttc
tccctgaggaagagcagattagtgcatggctacattgctgtgtactcagcccgccgcaag
gcctccctggagactctatgtgccttcctgtgtgagatccaggacatcatccctgttcag
ctgctggcagtaggggagagccaggtggagctcacagaaagtgagtctgccagagagcag
ctagtccagggagaggagctggcccaagagatagaaggcaggttcaacagtgtggtgtgt
gggtctggaggggtggtgggcggcctgcacaggatagagatgttccagcacttcctgatg
gaggtggtggagaaacgcaacattgtggaggcaacacacatgtatgataacgtggctgag
gcctgcactaacgacactgcctactcccctcgctgtagctcacccagccctggcaacatg
ttcctagactctgatgtggatgacgtggagccctccccaccctacttcgatggcacactc
acctcccatggtgggggcttcaacctgcctgacctggactccagcgatgtctcggtcatc
tctgacatcagctcctttgagaacaaactcaacagcaaggtccctccccaggtgaggccc
aagcccactgtgacctttgacttccggaaggtgggccgaaacccctacaacacggatacc
atgggccaccgtcgctccctgccctctgctgtgacatgggtaccaggtggggacggaggt
tacgacccctcagactatgcagagcctatggatgctgtgtccaagccccggcccagcaac
gaggagatcatctactctgtgccccatgacagcacgcagggcaagataatcaccatccgc
aacgccaacaggatgcactcaaatggaaacggctcggacagtgaggcagacagcagttcc
ctggagcgctgcaggaagttctcggcggcgggggtgaagccccggctgtaccgggaccgc
tccaaacgcctgggtaagttcagcagctttcgcactagcttcattggcagcgacgacgag
atgggggccctgccaaagaccaaggaggatgagttcggaaccctgaaaggagacatcatc
aatgaggagggagaggaccccaagaagaggaacattctgaagagcctacggcgaactgcc
aagaaaaccagaccaaagcctcggccctctattcccaagcccctggagagcaactacttc
ggggtacccctgatcaatgtggtgttcccagacagacctatcccactttttattgacaag
tgtgtccacttcattgagaccaccggcctcaacacagaggggctgtacagggtgagcggg
aacaagtgtgagatggagagcatgcagaggcagtttgaccaggaccatgggctggaccta
gtggagaaggactttgccatcaacacggtggctggggctctgaaggccttcttctctgag
ctgccggagccattggtgccctgcattctgcaggtggagctgctcgaggccttcaaaatc
aatgacagggaacaaaggctctacaccatgaaggatgtgctgaggaagttccccagggag
aactatgacgttttcagatttgtcatgagccacttacacaaggtgagccagctgagcaga
cagaacctgatgaccagtgagaatctgtccatctgtttctggcccactctgatgcggcca
gacttcaccaccatggacgccctgacggccacgcggacctaccagacaatcatcgagacc
ttcatccaccagtgtgctttcttcttctacaaccagcccctcctggactcccccactggc
ctggctggcctccctgcctcccccaccaccaccctcaccggtggctctacctattcctgc
taccgctcctcccctcccccaccaccacgcaattcagccccctgcagcagtcgcccccac
caccccccagtcacccctgcagtccctcctccccctccaccaacacccccactgcgcccc
caccgagcaagagacactgtaaaagacactgtgaaagacactgagaagggagcacacgcc
gtacccctgatctga
DBGET
integrated database retrieval system
