Oncorhynchus tshawytscha (Chinook salmon): 112258548
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Entry
112258548 CDS
T05605
Symbol
hoxb4a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-B4a
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112258548 (hoxb4a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112258548 (hoxb4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
112258548
NCBI-ProteinID:
XP_024288754
LinkDB
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Position
LG27:complement(5568805..5573683)
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AA seq
250 aa
AA seq
DB search
MAMSSYLINSNYVDPKFPPCEEYSQNDYLPSHSPDYYSAQRREPAFQNESIYNQRSGCAD
PPYTTCQGPGQPTVVISPRGHVLPPAGLSTPLPEPSHHCDSVTPSPPPACGQNPLNQSPS
TASSRKDPVVYPWMKKVHVNIVNPNYTGVGEPKRSRTAYTRQQVLELEKEFHYNRYLTRR
RRVEIAHTLVLSERQIKIWFQNRRMKWKKDHKLPNTKIRSNSNSNNTNSQSSGLALGSSQ
NRTSGPPPSL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggccatgagttcctatttgatcaactcaaactatgtggaccccaagtttccaccctgc
gaggaatattcacagaatgactacctacccagtcattctccggactactacagcgcccag
aggcgagagcctgcgtttcagaatgagtcgatctacaaccagcggtcaggctgcgccgac
ccgccttacacgacgtgccagggtccggggcagcccacggtggtgatatctccacggggt
cacgtcctccccccagccggactctcaacccctctcccggagcctagccaccattgcgac
tccgtaactccaagccctccacccgcgtgtggccagaatcccctcaaccaaagcccgtcc
acggccagctctcgcaaggatccggtggtttacccctggatgaaaaaagtccacgtaaac
atcgtgaatccaaattacacaggggtgggtgagcccaagcgctcgcggacagcctacacg
cgacagcaagtcctggagctggagaaggagttccactacaatcgctatctgacccggaga
cgcagagtggagatcgcccacaccctggttctgtccgaacgccagatcaaaatctggttc
cagaaccggcggatgaaatggaagaaagaccacaagctgcccaacaccaagatccgctcc
aacagtaactccaacaacacaaactcgcaaagcagcgggctcgcgctggggagttctcag
aaccgaaccagcgggcctccaccgagcctatag
DBGET
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