Oncorhynchus tshawytscha (Chinook salmon): 112259609
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Entry
112259609 CDS
T05605
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00250
Alanine, aspartate and glutamate metabolism
otw00410
beta-Alanine metabolism
otw00430
Taurine and hypotaurine metabolism
otw00650
Butanoate metabolism
otw01100
Metabolic pathways
Module
otw_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112259609
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
112259609
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
112259609
00430 Taurine and hypotaurine metabolism
112259609
Enzymes [BR:
otw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
112259609
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SHMT
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
112259609
NCBI-ProteinID:
XP_024290008
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Position
LG10:complement(57029645..57037760)
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AA seq
569 aa
AA seq
DB search
MQTCQYCIGSSCTPGLIVPESIIEHAKPGGQVLAESIQHRSSSDINPPQTASDNTCSITK
DFSCIYSKDLLPALRGEDTTKSFFQELVNILLSYVCKSFRRSSKVLDFHHPHQLREGLEG
FSLELPDQPENLEQLLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGLAGEWLTSTANTNM
FTYEVSPVFILMEEILLRKMQEIVGWSEEEGDGVFCPGGTMSNLYSVLLARYHFFPEVKT
KGMTALPRLILFTSAHSHYSVKKSAAVLGIGSDNVVVVKCNDRGKMITAELESSIITAKD
QGCVPFYVNATAGTTVYGAFDPLNAIADICESHGLWLHVDAAWGGGLLMSKRHRVKLQGI
ERAWSVTWNPHKMMGAPLQCSAILVKKRGLLKDCNQMCAEYLFQTDKHYDTSYDTGDKTI
QCGRHVDVFKLWLMWKAKGSEGFESQVNKCLENAEHLFDKLKQRPDFELVFKSEPEHSNV
CFWYIPPSLRNMSPGPERNRRLHEVAPKIKAKMMEQGMAMIGYQPLGDKVNFFRCVFSNP
ATQTEDVDYLLEEIASLGHDICIRTETDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatgtcaatattgtattggatcatcatgtactccgggtttaattgttccagaa
agcataattgaacatgctaaaccaggtgggcaggttttggcagagagtatacagcacaga
agctcatctgacatcaaccctccacagacagcaagtgataacacctgcagcataaccaag
gacttcagttgcatctacagcaaagatctactccctgctctccgtggtgaggacacaacc
aaaagtttcttccaagagctggtgaacattctcctcagctatgtctgcaagtcgttcaga
cggagctccaaagtcctggacttccaccaccctcaccaactcagagagggcctggagggc
ttcagtctggagctcccagaccagcccgagaacctggaacaactcctggtcgactgcagg
gacaccttgaagtatggagtcaaaacaggtcacccacgcttcttcaatcagctgtcatca
ggtctggatgtcatcggtttggccggggaatggctgacatctactgccaacacaaacatg
tttacttatgaagtgtccccagtgttcattctgatggaggagattctactgaggaagatg
caagagattgtgggttggtcagaggaagagggggatggtgttttctgtccaggtgggacc
atgtccaatctgtacagtgtactactggccagataccacttctttcctgaagtgaagacc
aaagggatgactgctctgcccaggctaatcctcttcacatcagcacatagtcattattca
gtcaagaaatctgcagcagtccttgggataggaagtgataatgttgtggtggtgaaatgt
aatgaccggggaaaaatgatcactgcagaattggagtcaagtatcattactgccaaagat
cagggttgtgtcccattctacgtcaatgccacagcaggcaccactgtgtacggagccttt
gatcctctcaatgccatcgcagacatctgtgagagccatggactctggctgcatgttgat
gcagcctggggcggaggactgttgatgtccaagcggcaccgtgtgaaactacaagggatt
gaacgagcctggtctgtgacttggaaccctcataaaatgatgggtgctccgctgcaatgc
tcagccatactggtgaagaaaaggggcctcttgaaagactgcaatcagatgtgtgctgaa
taccttttccaaactgacaagcactacgacacctcttatgacaccggagacaagaccatt
cagtgtggcaggcatgttgatgtcttcaagctctggctcatgtggaaggccaagggttca
gaaggcttcgaatcacaggtcaataaatgtttggaaaatgctgagcacttgtttgacaaa
ctcaaacaaagaccagactttgaacttgtcttcaaaagcgaacctgaacacagcaacgtg
tgcttctggtacattccaccaagtctgaggaacatgtcaccaggtcctgagaggaacagg
agactccatgaggtggcaccaaagatcaaagccaagatgatggagcaggggatggccatg
attggctatcagccgctcggagacaaagttaacttcttccgatgtgtcttctccaaccca
gccacacagacagaggatgtggactacctcttggaggagatcgcttctcttggtcatgac
atctgcatcaggactgaaaccgatttgtga
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