Oncorhynchus tshawytscha (Chinook salmon): 112259847
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Entry
112259847 CDS
T05605
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04210
Apoptosis
otw04217
Necroptosis
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112259847
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112259847
04217 Necroptosis
112259847
04218 Cellular senescence
112259847
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112259847
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
112259847
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112259847
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
112259847
NCBI-ProteinID:
XP_042184142
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Position
LG10:16385283..16419590
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AA seq
704 aa
AA seq
DB search
MEQVYASGMAAKLRSQWDRDEGLGQNHNAVKFQGQDFESLRAQCLQSSSLFEDSLFPCAA
SSLGFNELGPRSSKTQGVRWKRPPEICTRPQFIMDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQDFGGQYAGIFHFQFWQYGEWVEVVIDDRLPVKDGKLLFVHSAEGGE
FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPSDLYSIISRAVERG
SLLGCSIDITGSHDMEAVTFKKLVKGHAYSLTGVDEVVYRGNKTKLVRIRNPWGEIEWTG
AWSDNSREWEGVDRSVRGRLQNCSEDGEFWMSFSDFLLEFTRLEICNLTADALEATQQKK
WSSAVYQGEWRSGSTAGGCRNFPATFWINPQFKVALQHPDTAGQSDCSFLVALMQKDRRK
KRKEGKDMETIGFAIYEVPNEYMGKSGVHLKRDFFLTHGSSARSELFINLREVSSRFQLP
AGEYIIVPSTFEPKKEGDFVLRVFSEKPANYEELDDDVTAELPAETELDESQIDAGFKSL
FRQLAGEDMEISATELQTILNRIMTKHKDLKTDGFGPDSCRTMINLMDTDGSGKLGLTEF
HVLWEKIKRYLTIFRQFDLDKSGTMSSYEMRMALEAAGFKLTNHLFQLIILRYTEADLAV
DFDNFVTCLVRLETMFKTFKTLDTDADGVIQLNFFQWISLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgtacgcatcagggatggccgccaagctgcggagccagtgggaccgggac
gagggtctgggtcagaaccacaacgccgtgaagttccagggccaggactttgagtcgctg
agggcccagtgtctccagagcagcagcctgtttgaggacagcctgttcccctgcgccgcc
tcctctctggggttcaacgagctgggaccccgctcctccaagacgcagggagtacgctgg
aagagacccccggagatctgcacccgtccccagttcataatggatggagccactcgcact
gatatctgccagggagctctcggtgactgctggttgctggcagccatagcttcgttgact
ttgaatgataatctcctccacagagtggttcctcatggacaggacttcggaggacagtac
gctggcatcttccacttccagttctggcagtatggggagtgggtggaggtggtgatcgat
gacaggctgccggtgaaggatggcaagctgctgtttgtccactctgccgagggaggagag
ttctggagcgccctgctggagaaggcctatgccaagttgaatggctgttatgaggctctg
tcgggaggcagcacgtcagagggttttgaggacttcacaggaggagtgacggagatgttc
gagctgaggaaggcgccctctgacctttacagcatcatcagccgggccgtggagagaggc
tcactgctgggctgctccatagacatcaccggcagtcatgacatggaggccgtgaccttt
aagaagctagtgaaaggccacgcctactcattgacaggggtcgacgaggtggtgtacagg
gggaataagaccaaactggtccgtattcgcaacccctggggagagatagagtggactggg
gcctggagtgacaactccagagagtgggagggtgttgaccgctcagtcagagggcgactc
cagaactgcagtgaggacggagagttctggatgtcgttcagtgacttcctgcttgagttc
acacgtctggagatctgcaacctgacagcagacgctctggaggccacccagcagaagaag
tggagctcagccgtctaccagggggagtggaggtcaggcagcacggctgggggctgcagg
aacttccctgccacattctggatcaacccgcaattcaaggttgccctgcagcaccccgac
acagccggccaatcagattgcagcttcctggtggcgctcatgcagaaggaccggagaaag
aaacgcaaggagggcaaagacatggagaccatcggtttcgccatctacgaggttcctaat
gagtacatgggtaaatcaggcgtccacctgaagagagacttcttcctgacacacggttcc
agcgcccgctctgagctcttcatcaacctgagagaggtgagctctcgcttccagctgcct
gccggggagtacatcattgtcccctccacctttgaacccaagaaggagggagacttcgtc
ctcagggtcttctctgagaaacctgccaactatgaggagctggatgatgatgtcacagct
gaactaccagcagagaccgagctggacgagagccagatcgacgctggcttcaagagtctg
tttagacaactggctggagaggacatggagatcagtgccacagagctgcagactattttg
aacaggatcatgaccaagcacaaagatctgaaaacagatggatttggaccagattcctgt
cggactatgatcaacctgatggacactgatggtagtggtaaactgggattgacagagttc
catgtgctgtgggagaagatcaaacgatacctgactatattccgtcagtttgatctggac
aagtcaggcaccatgagttcctatgagatgaggatggctctggaggcagcagggttcaag
ctgacaaaccacctgttccagctgataatattgcgttacactgaggccgacctggcagtt
gactttgacaactttgttacctgcctggttaggctggagaccatgttcaagaccttcaag
acgttggacacagatgccgatggagtcatacaactcaacttcttccagtggatcagcctg
accatgtttgcctag
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