Oncorhynchus tshawytscha (Chinook salmon): 112260055
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Entry
112260055 CDS
T05605
Name
(RefSeq) endothelial PAS domain-containing protein 1 isoform X1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260055
04131 Membrane trafficking [BR:
otw04131
]
112260055
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112260055
Membrane trafficking [BR:
otw04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
112260055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
AAT
Motif
Other DBs
NCBI-GeneID:
112260055
NCBI-ProteinID:
XP_024290624
LinkDB
All DBs
Position
LG01:92276961..92364818
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AA seq
847 aa
AA seq
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MTADKDKKRNSSERRKERSRDAARCRRSKETEVFYELANQLPLPDSVSSHLDKASIMRLA
ISFLRTRKVIGSGCPNSAEEDRQMDCMYLKSLEGFVTVVTSDGDMIFLSENVNKLMGLTQ
VELTGQSIFDFTHPCDHDEIRENLNLKTGTGTKGKAFSTERDFFMRMKCTVTNRGRTVNL
KSASWKVLHCTGHLKVYNSCTPHGLCGFKEPPLTCLLMMCEPIPHPSNIDTPLDSKTFLS
RHSMDMKFTYCDDRVTELMGYSPEDLLGCSVYELYHALDSDSVTKSHQNLCSKGQAMSGQ
YRMLAKHGGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDVENKSMIFSMDQTESLFKPH
NMNSFFSQSGAAVATEPMEILFTKLKEDPEDLAQLAPTPGDAIITLDFGRPPFEEPHPPL
YPKMSPMPPPAPQGRDSDPHKPCPSGDMSKQMAATFSVPQNPTPGSATPSTAPPSLSSYS
TPSSPGDYYNERESDLKVELTEKLFALDTEGPKSPGSTQSALSDLDLETLAPYIPMDGED
FQLHPIIPEEVPGGPEGATGPLGHLTTQNSFRNIASLFQNLRSPQSDHYHPAKCAPGDKR
GPNHSQMSPMDSRPTLLYTGPIQIPPYHAPASTPLSSMGGHQNLQWPPDPPLNSLLQVNS
MGRSHSCQNMPVNMMHKQRSMENFVQAYRDMSPTRISIANNVKRSFTQMAVGDSTLSTPS
KMTRNESYAIMDRSLSTSSLEVKGMCMPGGVDKCLIPLQRHRKSRYPGCVNGTSRKSFPK
QCCNYKEYRMLPSSKTEGVASRLLGPSIETYCLPELTRYDCEVNVPLQGNLHLLQGSDLL
RALDQAT
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgataaggacaagaaaaggaacagttcggagcggcgtaaggagaggtctcgt
gacgcggcacgctgtcgtcgtagtaaggagacggaggtgttttacgagctggccaatcag
ctgcccctcccagacagcgtcagctcccacctggacaaagcctccatcatgagactggcc
atcagcttcctgcgcacccgcaaggtcatcggttcaggctgccccaacagtgcagaggag
gacagacagatggactgtatgtatttgaagtcactggaggggttcgtcactgtggttaca
tcggatggcgacatgatcttcctctcagaaaacgtcaacaagttaatgggcttaacacag
gtggagttgaccggacaaagcatatttgacttcacccacccctgcgaccacgacgagatt
cgcgagaacctcaatctgaaaaccggtactgggacaaaggggaaagccttcagcactgag
agagacttcttcatgaggatgaagtgcacagtgacaaaccgtggacgcactgtcaacctg
aaatcagccagctggaaggttctgcactgcacgggccacctcaaggtgtacaacagctgc
acccctcatgggctgtgtgggttcaaggagcctcctctcacctgcctgctgatgatgtgt
gagcccatcccccacccctccaacatcgacacacccctggacagcaagaccttcctgagc
cgtcacagcatggacatgaagttcacctactgtgacgacagagtcactgagctgatgggc
tacagtcctgaagacctgctgggctgctctgtctatgagttgtaccacgccctcgattct
gacagtgtcaccaagagccaccagaacctgtgcagtaaaggccaggcaatgagtggacag
tatcgtatgctggccaaacatggaggctacgtgtgggtggagacccagggcacagtcatc
tacaacagccggaattcccagccgcagtgcattgtctgtgtcaactatgtcctcagtgac
gtggagaacaagtccatgatcttctccatggaccagactgagtccctgttcaagccacac
aacatgaacagcttcttcagccagagtggtgctgcggtggccacggaacccatggagatc
ctgttcaccaaactgaaagaggacccagaggaccttgctcaactggcccccacacctgga
gacgccatcatcaccctcgactttggaaggccaccatttgaggagcctcatcctccttta
taccccaagatgtctcccatgccccccccggccccccagggcagggatagtgatccccac
aaaccctgcccatcaggagacatgtccaaacaaatggctgccactttctcagtaccccag
aaccctacaccgggcagcgccacccccagcactgccccccctagcctgagcagttattcc
acgcccagcagcccaggggattactacaatgagagagagagtgacttgaaggtagagctg
actgagaagctctttgctctcgacacagaggggcccaagagccctgggagcacccagtcg
gccctgagtgatctggacctggagaccctggcaccctacatccccatggacggagaggac
ttccagctccatcccatcattcctgaggaggtacctggaggcccagagggggccaccggc
ccactgggccacctcaccacacagaatagcttcagaaacatcgccagcctcttccaaaat
ctgagatccccacagtctgaccactaccaccccgccaagtgtgccccaggagacaagaga
ggccccaaccacagccaaatgagccccatggactccaggcctactctgctatacacaggc
cccatacagatccccccctaccacgccccagccagcacacctctgtcctccatgggtgga
catcagaacctgcagtggcccccagatcctccgttaaactctctactacaggtgaactcc
atgggcagaagccactcatgtcagaacatgccagtcaacatgatgcacaagcagaggtca
atggagaactttgtccaggcctacagagacatgagtcccaccagaatctccatagccaac
aacgtcaagcgctccttcacacaaatggcagtgggtgactccaccctcagtactccttca
aagatgacgaggaatgaaagctatgccatcatggacagatctctcagcaccagctcactg
gaagttaaaggtatgtgcatgcctgggggtgttgacaagtgtctcattccccttcagcgg
cacaggaagtctcggtatccaggatgtgtaaatggtacatccagaaaatccttccccaaa
cagtgttgcaactacaaagaataccgtatgctgccctcctccaaaacagagggggttgcc
agtcggctgttgggcccatccattgagacctattgtctgccagagctcacccgctacgac
tgtgaggtcaacgtccctctccagggcaacctacacctgctgcagggcagtgacctgctg
agagccctggaccaggccacctag
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