Oncorhynchus tshawytscha (Chinook salmon): 112260178
Entry
112260178 CDS
T05605
Definition
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112260178
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112260178
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112260178
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112260178
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Gal type
112260178
SSDB
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Glycos_transf_2
PRTase_3
Other DBs
NCBI-GeneID:
112260178
NCBI-ProteinID:
XP_024290849
LinkDB
Position
10
AA seq
591 aa
MFLWVLVLVAFVSRTECYFSEEKYQEESKIQPPTIIIAIIARNAAHSLPYYLGALERQNY
PKNRISVWAATDHNADNTTAVLKEWLTVMQKFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKQRWADYILYVDTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSINFSHLILDAMIDG
PSMAPSKYVSLFPKRRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVTPGDEEEVVENVRNLVVADYSYWTLSY
AISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHINEDYKSHFANRNLQAFSTRPLLVQPA
HYAGDPEWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQSDMLQATYKDEL
NT seq
1776 nt
+upstream
nt +downstream
nt
atgtttctttgggttttagttttagtggccttcgtttccagaacagaatgttatttttcg
gaggaaaaatatcaagaagaatcgaaaattcagccgccaacgattattattgcgatcatt
gctcggaacgcggcgcactctttgccatactacctcggggcgttggagaggcagaactat
cccaaaaaccgcatctctgtatgggcagcaacagatcacaacgctgacaacactacagct
gttctgaaagaatggctgaccgtcatgcagaagttctatcactatgtggagtggaggccc
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagcaacgctgggct
gactacatactgtatgtagacacagacaacatcttgaccaacccagagaccctcaacctc
ctgatagcagagaacaagtctgtggtcgcccccatgttggactcccagggagcttactct
aactactggtgcggcatcactccacagggttactaccggcgtacggctgagtatttcccc
accagacaccgccatcggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggaatgaagaagctggccttccaccctcctcaccaggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgtcgcgtctcagaggtgcag
atgtacctgtgcaacaaggtgaggtatggatacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcaacttcagccacctcatcctggacgccatgattgacgga
ccctccatggccccctccaaatatgtcagcctcttccccaaacggagagacctcatgggc
tttgatgaggtgtacctgatcaacctgcgtcggcgtcaggaccgtagggacaggatgctg
tactctctcaacgagctggagatcgacgtcaaagtggtggacgccatagacggaggagcg
ctgaacagcagtgatataaagatccttggagtggacatactacctggttactatgacccg
ttctctcgtcgtaccctgaccaaaggagaggtgggatgcttcctcagccactattacatc
tggaaggagatggtagaccagcagatggataaggctctgatcttcgaggacgacgtgcgt
ttccaggccaacttcaagcggcgcgtgctccgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgacgccgggtgacgaggaggag
gtggtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctac
gccatctctctccagggggcccagaagctgctcaacgccgaacccctctccaagatgctg
cccgtcgacgagttcctgcccatcatgtacgacaaacacatcaatgaggactacaagtct
cacttcgcgaaccgtaacctgcaggcgttctctacgcgcccccttctggtgcaaccagcc
cactacgctggggaccccgagtgggtgagcgacacggagacctccacgctgtgggacgac
gacaacgtgcgaacagactggaggggttcccacaaaaccctgaagggggcacctcaatcc
gacatgctgcaggcaacgtataaggatgagctctag
DBGET
integrated database retrieval system
