KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112262718
Entry
112262718         CDS       T05605                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
  KO
K10644  E3 ubiquitin-protein ligase CHFR [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112262718
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112262718
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112262718
SSDB
Motif
Pfam: zf-CRD FHA zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-CCHH zf-RING_6 zf-rbx1 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 112262718
NCBI-ProteinID: XP_024294207
LinkDB
Position
LG12:complement(22485534..22506364)
AA seq 758 aa
MEKKHGRSQPWGKLVKVDSQSEVLLVNRECTVGRRKGCDLSFPANKLVSGDHCKIVQDKS
SGLVWLEDTSTNGTVINMSKLVKKQIHMLQNGDVIYFVYRKNEPEQNLAYMYQSIKPERT
FSQDTIGGATRCSVMQQKAQTCPVTAAVCVSVEPFLVGPPREQQALDEPQPSTSSHLLHT
VSSSTACSSAASLLHSSALAAEGKAGQHNTNLFCSTDTRQTEAQNRVTMLYKEGDMEPER
KRRKTDSADKDYDFGLPHTSSIAVVGPSPAKVFLIGDLFGKAAVAVEEAKTDKMEESLTC
IICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERIRKNHIINNLVEAYLI
QHPEKCRSEEDLKSMDSRNKITRDMLQPKIERSFSDEEGSSDYLFELSDNDSDTSDIGQP
VVMCRQCPGYRKEVSQVLWATGLAPLGPAPPALLGPAPPALQGPALLGPDPPALLGPALL
GPAPPALPGPALLGPAPPALLVPAPPALLGPVLPAPLGPAPPAPLGPAPPAPLGPAPPTP
EDRPGKPPGAGESTLSTCSDVPTTAPQDYTCPPLGSHVICTCCLQPMPDRRAELIGQQLS
AQQCVACLRPFCHMYWGCQRIGCQGCLARFSELNLTDKCLDGVLNSNNYESEILQSYLSA
RGMSWRDMLQEGLQGLQQGTFYLSDYRINSNAILCFCCGLRAFGELAYKYRQNIPASALP
AVVTSRPDCYWGRNCRTQVKAHHATKFNHICEQTRFKS
NT seq 2277 nt   +upstreamnt  +downstreamnt
atggagaagaagcatggaaggagtcaaccatgggggaagttagtaaaagtggactctcaa
tctgaagtattgcttgtcaacagggaatgcactgtcgggcgaagaaaaggctgtgatctt
tcctttcctgctaacaaactggtctcgggggatcactgtaagatagtgcaagataagagc
tcaggattggtgtggctggaggacacaagcaccaatggtacagtgattaacatgtctaag
ctggtgaagaagcagattcatatgctgcagaatggagacgtcatctactttgtatacagg
aaaaacgaaccagagcaaaaccttgcctacatgtatcagtccataaaaccagagaggaca
ttctcacaagacacaattggtggtgccaccagatgctcagtaatgcagcagaaagcccag
acctgccctgttacagcagcagtatgtgtgtctgtggagccattccttgttggacctcca
cgggagcagcaggccttggatgaacctcagccctccacctcctcccacctcctccacaca
gtctcctcctctacagcctgttcctctgcagcctccctccttcactcctctgccttagct
gctgaaggcaaggctgggcagcacaacactaacctcttctgctcaacagacacacgacag
actgaagcccagaaccgagtcacaatgttgtataaggagggggacatggaaccagagaga
aaaaggaggaaaactgacagtgctgacaaggactatgattttggactgccacatacttcc
agtattgcggtggtcggccccagcccagctaaggtttttcttatcggggatctgtttgga
aaagctgctgtggctgtggaagaagccaagactgacaagatggaggagtccctaacctgt
atcatctgtcaggacctacttcatgactgtgtcagcctgcagccctgtatgcacaccttc
tgtgctgcgtgctactctggctggatggagcgctcgtctctctgccccacctgtcgctgc
cccgtagagaggatccgcaagaaccacatcatcaacaacctggtggaggcctaccttatc
caacacccggagaagtgtcgcagtgaggaggacctgaagagcatggacagccggaacaag
ataactcgggacatgctgcagccaaagattgagcgttccttctctgatgaagagggcagc
tctgattatctctttgagctctccgacaacgacagtgacacctccgatatcggccagccg
gttgtgatgtgcagacagtgtccaggctacaggaaggaggtcagccaggtactgtgggcc
acagggctagcccctctaggaccagccccaccagctcttctaggaccagccccaccagct
cttcaaggaccagctcttctaggaccagacccaccagctcttctaggaccagctcttcta
ggaccagccccaccagctcttccaggaccagctcttctaggaccagccccaccagctctt
ctagtaccagccccaccagctcttctaggaccagtcctaccagcccctctaggaccagcc
ccaccagcccctctaggaccagccccaccagcccctctaggaccagccccaccaactcct
gaggacaggccagggaaaccccctggggctggggaatcaacattatcaacatgctctgat
gtccccactacagctcctcaggattacacctgtcctcctctgggcagccatgtcatctgc
acctgctgcctgcagcccatgccagaccgccgcgccgagctcattggccagcaactctcc
gctcagcaatgtgtggcgtgcctgcggcccttctgtcacatgtactggggctgccagagg
attggctgtcagggctgcctcgcacgtttcagtgaactcaaccttacagacaaatgcctg
gacggtgttctgaacagcaataactatgaatcagagatcctccagagttacttgtcagcc
agagggatgtcgtggagggacatgctacaggagggtcttcagggcctgcaacagggaacc
ttctatctgtctgattatcgcatcaacagtaacgccatactctgtttctgctgtggcctg
cgagccttcggggagctggcctacaaatacagacagaacatccctgcctcggcgcttcct
gctgttgtgacgtctcggccagactgttattggggacgcaactgccgtactcaagtcaag
gcacaccatgccacgaaattcaaccacatatgtgagcagacccgtttcaagagctga

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