Oncorhynchus tshawytscha (Chinook salmon): 112262718
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Entry
112262718 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112262718
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112262718
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112262718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-CCHH
zf-RING_6
zf-rbx1
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
112262718
NCBI-ProteinID:
XP_024294207
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Position
LG12:complement(22485534..22506364)
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AA seq
758 aa
AA seq
DB search
MEKKHGRSQPWGKLVKVDSQSEVLLVNRECTVGRRKGCDLSFPANKLVSGDHCKIVQDKS
SGLVWLEDTSTNGTVINMSKLVKKQIHMLQNGDVIYFVYRKNEPEQNLAYMYQSIKPERT
FSQDTIGGATRCSVMQQKAQTCPVTAAVCVSVEPFLVGPPREQQALDEPQPSTSSHLLHT
VSSSTACSSAASLLHSSALAAEGKAGQHNTNLFCSTDTRQTEAQNRVTMLYKEGDMEPER
KRRKTDSADKDYDFGLPHTSSIAVVGPSPAKVFLIGDLFGKAAVAVEEAKTDKMEESLTC
IICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERIRKNHIINNLVEAYLI
QHPEKCRSEEDLKSMDSRNKITRDMLQPKIERSFSDEEGSSDYLFELSDNDSDTSDIGQP
VVMCRQCPGYRKEVSQVLWATGLAPLGPAPPALLGPAPPALQGPALLGPDPPALLGPALL
GPAPPALPGPALLGPAPPALLVPAPPALLGPVLPAPLGPAPPAPLGPAPPAPLGPAPPTP
EDRPGKPPGAGESTLSTCSDVPTTAPQDYTCPPLGSHVICTCCLQPMPDRRAELIGQQLS
AQQCVACLRPFCHMYWGCQRIGCQGCLARFSELNLTDKCLDGVLNSNNYESEILQSYLSA
RGMSWRDMLQEGLQGLQQGTFYLSDYRINSNAILCFCCGLRAFGELAYKYRQNIPASALP
AVVTSRPDCYWGRNCRTQVKAHHATKFNHICEQTRFKS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagcatggaaggagtcaaccatgggggaagttagtaaaagtggactctcaa
tctgaagtattgcttgtcaacagggaatgcactgtcgggcgaagaaaaggctgtgatctt
tcctttcctgctaacaaactggtctcgggggatcactgtaagatagtgcaagataagagc
tcaggattggtgtggctggaggacacaagcaccaatggtacagtgattaacatgtctaag
ctggtgaagaagcagattcatatgctgcagaatggagacgtcatctactttgtatacagg
aaaaacgaaccagagcaaaaccttgcctacatgtatcagtccataaaaccagagaggaca
ttctcacaagacacaattggtggtgccaccagatgctcagtaatgcagcagaaagcccag
acctgccctgttacagcagcagtatgtgtgtctgtggagccattccttgttggacctcca
cgggagcagcaggccttggatgaacctcagccctccacctcctcccacctcctccacaca
gtctcctcctctacagcctgttcctctgcagcctccctccttcactcctctgccttagct
gctgaaggcaaggctgggcagcacaacactaacctcttctgctcaacagacacacgacag
actgaagcccagaaccgagtcacaatgttgtataaggagggggacatggaaccagagaga
aaaaggaggaaaactgacagtgctgacaaggactatgattttggactgccacatacttcc
agtattgcggtggtcggccccagcccagctaaggtttttcttatcggggatctgtttgga
aaagctgctgtggctgtggaagaagccaagactgacaagatggaggagtccctaacctgt
atcatctgtcaggacctacttcatgactgtgtcagcctgcagccctgtatgcacaccttc
tgtgctgcgtgctactctggctggatggagcgctcgtctctctgccccacctgtcgctgc
cccgtagagaggatccgcaagaaccacatcatcaacaacctggtggaggcctaccttatc
caacacccggagaagtgtcgcagtgaggaggacctgaagagcatggacagccggaacaag
ataactcgggacatgctgcagccaaagattgagcgttccttctctgatgaagagggcagc
tctgattatctctttgagctctccgacaacgacagtgacacctccgatatcggccagccg
gttgtgatgtgcagacagtgtccaggctacaggaaggaggtcagccaggtactgtgggcc
acagggctagcccctctaggaccagccccaccagctcttctaggaccagccccaccagct
cttcaaggaccagctcttctaggaccagacccaccagctcttctaggaccagctcttcta
ggaccagccccaccagctcttccaggaccagctcttctaggaccagccccaccagctctt
ctagtaccagccccaccagctcttctaggaccagtcctaccagcccctctaggaccagcc
ccaccagcccctctaggaccagccccaccagcccctctaggaccagccccaccaactcct
gaggacaggccagggaaaccccctggggctggggaatcaacattatcaacatgctctgat
gtccccactacagctcctcaggattacacctgtcctcctctgggcagccatgtcatctgc
acctgctgcctgcagcccatgccagaccgccgcgccgagctcattggccagcaactctcc
gctcagcaatgtgtggcgtgcctgcggcccttctgtcacatgtactggggctgccagagg
attggctgtcagggctgcctcgcacgtttcagtgaactcaaccttacagacaaatgcctg
gacggtgttctgaacagcaataactatgaatcagagatcctccagagttacttgtcagcc
agagggatgtcgtggagggacatgctacaggagggtcttcagggcctgcaacagggaacc
ttctatctgtctgattatcgcatcaacagtaacgccatactctgtttctgctgtggcctg
cgagccttcggggagctggcctacaaatacagacagaacatccctgcctcggcgcttcct
gctgttgtgacgtctcggccagactgttattggggacgcaactgccgtactcaagtcaag
gcacaccatgccacgaaattcaaccacatatgtgagcagacccgtttcaagagctga
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