Oncorhynchus tshawytscha (Chinook salmon): 112263288
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Entry
112263288 CDS
T05605
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112263288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263288
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112263288
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112263288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
112263288
NCBI-ProteinID:
XP_024295148
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All DBs
Position
LG12:complement(40762266..40783069)
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDLLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSCEEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLGQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagtttctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagcaagggacagagcagccacccttattcaagcgctggtc
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgctgggaccacaaaaagaaatgcactatccatttttaaaattgcacggaag
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggctctttct
aaagacctcaccatcccttggatcaagcagattaaagatctcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgactttcacagacacatcaacctggaagatagtgagagggaaaggtgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccaggccctca
cttaccaagggcacactcacagcagtattcacgctggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctcctcatccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccacgacctg
ttgaggaagttcatcctgttccttagctgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctt
ggctggttctcccaaaccgtagactacggtctaaatgagtccatgccactggtcacgaag
cagttgcagtacctgtggggcatgcctgtgatccggactctcttcagtgacgtcctcagc
aaaaagctggagacccaagagcccacgcctccgccacaacctaccacatcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtacgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccaaacagccctcaccacgctcacccagatacgactgcaaatccttact
ggcctaacctacctggatgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaaa
cagctgctagccatgctcatgcttttttgtgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaggagcttgtcaccatc
tcctcatttctcaacacgtttgtttacaagatggtctgggatggcatcttggagaatgcc
aagggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctaaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcactcatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccggctctcaacctctttaagaccaccagtggcaatgagaggctgtacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaaaatgctcgga
aaagccatgtatgagggtatcgtggtagacgtacccttcgcctccttcttcctcggccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatt
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccagagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagatctggatgacctcaagaaacacacagtctactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtccgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcgtccacctgcttcaacctgctcaagctgcct
aactacagcaagaaaagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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integrated database retrieval system