Oncorhynchus tshawytscha (Chinook salmon): 112264392
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Entry
112264392 CDS
T05605
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04144
Endocytosis
otw04145
Phagosome
otw04148
Efferocytosis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112264392
04145 Phagosome
112264392
04137 Mitophagy - animal
112264392
04148 Efferocytosis
112264392
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112264392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112264392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112264392
04031 GTP-binding proteins [BR:
otw04031
]
112264392
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
112264392
Endosome - Lysosome transport
112264392
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112264392
Exosomal proteins of other body fluids (saliva and urine)
112264392
Exosomal proteins of colorectal cancer cells
112264392
Exosomal proteins of bladder cancer cells
112264392
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
112264392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
112264392
NCBI-ProteinID:
XP_024296737
LinkDB
All DBs
Position
LG13:complement(16948866..16955187)
Genome browser
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLASKRAVDFQDARSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPAAAGANSGRNRGVDLTEAAQPTKAPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggggaggtgctacgagacccaacgggtctaatgctgggaacaagatctgc
cagttcaagttagtgctgctgggggagtcggcggtgggcaagtccagcctggtgctccgc
tttgtcaagggccagttccacgagttccaggagagcaccataggagcggccttcctgacc
cagacggtgtgtctagacgacacgacggtgaagtttgagatctgggatacggcgggacag
gagcgctaccacagcctggcgcccatgtactacagaggggcgcaggccgccatcgtggtc
tacgacatcacaaatgaggagtcatttgcccgggccaagaactgggtgaaggagctgcag
agacaagccagccccaacattgtcatcgctctgtcaggcaacaaggctgacctcgccagc
aagagagctgtcgacttccaggatgcccggtcttatgcagacgacaacagcttgctcttc
atggagacgtcggccaagacatctatgaatgtgaacgagatattcatggctattgcgaaa
agattgcccaagagcgagcctgcagccgctggagctaacagtgggcggaacaggggcgtc
gacctaactgaagccgcccagccaaccaaggccccctgctgcagtaactaa
DBGET
integrated database retrieval system